GO Enrichment Analysis of Co-expressed Genes with
AT2G39480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 2 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 3 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 4 | GO:0016236: macroautophagy | 0.00E+00 |
| 5 | GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly | 0.00E+00 |
| 6 | GO:0009991: response to extracellular stimulus | 0.00E+00 |
| 7 | GO:0006903: vesicle targeting | 0.00E+00 |
| 8 | GO:0030242: pexophagy | 4.60E-05 |
| 9 | GO:0034620: cellular response to unfolded protein | 4.60E-05 |
| 10 | GO:0007584: response to nutrient | 1.13E-04 |
| 11 | GO:0019395: fatty acid oxidation | 1.13E-04 |
| 12 | GO:0043207: response to external biotic stimulus | 2.85E-04 |
| 13 | GO:0072583: clathrin-dependent endocytosis | 2.85E-04 |
| 14 | GO:0006612: protein targeting to membrane | 2.85E-04 |
| 15 | GO:0006893: Golgi to plasma membrane transport | 2.85E-04 |
| 16 | GO:2000114: regulation of establishment of cell polarity | 2.85E-04 |
| 17 | GO:0010107: potassium ion import | 3.84E-04 |
| 18 | GO:0045324: late endosome to vacuole transport | 3.84E-04 |
| 19 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 3.84E-04 |
| 20 | GO:0033320: UDP-D-xylose biosynthetic process | 3.84E-04 |
| 21 | GO:0018344: protein geranylgeranylation | 4.88E-04 |
| 22 | GO:0010225: response to UV-C | 4.88E-04 |
| 23 | GO:0006499: N-terminal protein myristoylation | 5.92E-04 |
| 24 | GO:0042732: D-xylose metabolic process | 5.98E-04 |
| 25 | GO:0033962: cytoplasmic mRNA processing body assembly | 7.13E-04 |
| 26 | GO:0017148: negative regulation of translation | 7.13E-04 |
| 27 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 8.33E-04 |
| 28 | GO:0000209: protein polyubiquitination | 8.94E-04 |
| 29 | GO:0048766: root hair initiation | 9.57E-04 |
| 30 | GO:0006605: protein targeting | 9.57E-04 |
| 31 | GO:0019375: galactolipid biosynthetic process | 9.57E-04 |
| 32 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.03E-03 |
| 33 | GO:0009846: pollen germination | 1.07E-03 |
| 34 | GO:0060321: acceptance of pollen | 1.09E-03 |
| 35 | GO:0030968: endoplasmic reticulum unfolded protein response | 1.09E-03 |
| 36 | GO:0006397: mRNA processing | 1.12E-03 |
| 37 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.36E-03 |
| 38 | GO:2000280: regulation of root development | 1.36E-03 |
| 39 | GO:0008202: steroid metabolic process | 1.36E-03 |
| 40 | GO:0006298: mismatch repair | 1.51E-03 |
| 41 | GO:0009698: phenylpropanoid metabolic process | 1.66E-03 |
| 42 | GO:0072593: reactive oxygen species metabolic process | 1.66E-03 |
| 43 | GO:0006468: protein phosphorylation | 1.67E-03 |
| 44 | GO:0000266: mitochondrial fission | 1.81E-03 |
| 45 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1.98E-03 |
| 46 | GO:0055046: microgametogenesis | 1.98E-03 |
| 47 | GO:0009738: abscisic acid-activated signaling pathway | 2.09E-03 |
| 48 | GO:0034605: cellular response to heat | 2.14E-03 |
| 49 | GO:0009887: animal organ morphogenesis | 2.14E-03 |
| 50 | GO:0009225: nucleotide-sugar metabolic process | 2.31E-03 |
| 51 | GO:0034976: response to endoplasmic reticulum stress | 2.49E-03 |
| 52 | GO:0006289: nucleotide-excision repair | 2.67E-03 |
| 53 | GO:0009695: jasmonic acid biosynthetic process | 2.85E-03 |
| 54 | GO:0006825: copper ion transport | 2.85E-03 |
| 55 | GO:0031408: oxylipin biosynthetic process | 3.04E-03 |
| 56 | GO:0009561: megagametogenesis | 3.63E-03 |
| 57 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.83E-03 |
| 58 | GO:0070417: cellular response to cold | 3.83E-03 |
| 59 | GO:0010118: stomatal movement | 4.04E-03 |
| 60 | GO:0010154: fruit development | 4.25E-03 |
| 61 | GO:0006623: protein targeting to vacuole | 4.68E-03 |
| 62 | GO:0008654: phospholipid biosynthetic process | 4.68E-03 |
| 63 | GO:0009723: response to ethylene | 4.86E-03 |
| 64 | GO:0006635: fatty acid beta-oxidation | 4.91E-03 |
| 65 | GO:0007264: small GTPase mediated signal transduction | 5.13E-03 |
| 66 | GO:0010583: response to cyclopentenone | 5.13E-03 |
| 67 | GO:0006914: autophagy | 5.60E-03 |
| 68 | GO:0006904: vesicle docking involved in exocytosis | 5.84E-03 |
| 69 | GO:0051607: defense response to virus | 6.08E-03 |
| 70 | GO:0006886: intracellular protein transport | 6.43E-03 |
| 71 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 6.57E-03 |
| 72 | GO:0006869: lipid transport | 6.83E-03 |
| 73 | GO:0015031: protein transport | 7.21E-03 |
| 74 | GO:0009817: defense response to fungus, incompatible interaction | 7.60E-03 |
| 75 | GO:0048527: lateral root development | 8.41E-03 |
| 76 | GO:0010119: regulation of stomatal movement | 8.41E-03 |
| 77 | GO:0009867: jasmonic acid mediated signaling pathway | 8.96E-03 |
| 78 | GO:0006887: exocytosis | 1.01E-02 |
| 79 | GO:0006897: endocytosis | 1.01E-02 |
| 80 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.35E-02 |
| 81 | GO:0010224: response to UV-B | 1.35E-02 |
| 82 | GO:0007165: signal transduction | 1.35E-02 |
| 83 | GO:0009737: response to abscisic acid | 1.39E-02 |
| 84 | GO:0035556: intracellular signal transduction | 1.44E-02 |
| 85 | GO:0006096: glycolytic process | 1.49E-02 |
| 86 | GO:0018105: peptidyl-serine phosphorylation | 1.73E-02 |
| 87 | GO:0006457: protein folding | 1.77E-02 |
| 88 | GO:0051726: regulation of cell cycle | 1.77E-02 |
| 89 | GO:0009845: seed germination | 2.10E-02 |
| 90 | GO:0006633: fatty acid biosynthetic process | 2.34E-02 |
| 91 | GO:0016036: cellular response to phosphate starvation | 2.38E-02 |
| 92 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.71E-02 |
| 93 | GO:0006470: protein dephosphorylation | 2.75E-02 |
| 94 | GO:0006979: response to oxidative stress | 2.80E-02 |
| 95 | GO:0006970: response to osmotic stress | 3.60E-02 |
| 96 | GO:0009860: pollen tube growth | 3.60E-02 |
| 97 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 98 | GO:0045454: cell redox homeostasis | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 2 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 3 | GO:0003988: acetyl-CoA C-acyltransferase activity | 1.13E-04 |
| 4 | GO:0003958: NADPH-hemoprotein reductase activity | 1.13E-04 |
| 5 | GO:0005047: signal recognition particle binding | 1.95E-04 |
| 6 | GO:0019829: cation-transporting ATPase activity | 1.95E-04 |
| 7 | GO:0005093: Rab GDP-dissociation inhibitor activity | 1.95E-04 |
| 8 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 2.85E-04 |
| 9 | GO:0016004: phospholipase activator activity | 3.84E-04 |
| 10 | GO:0017137: Rab GTPase binding | 4.88E-04 |
| 11 | GO:0048040: UDP-glucuronate decarboxylase activity | 5.98E-04 |
| 12 | GO:0003730: mRNA 3'-UTR binding | 7.13E-04 |
| 13 | GO:0070403: NAD+ binding | 7.13E-04 |
| 14 | GO:0008195: phosphatidate phosphatase activity | 7.13E-04 |
| 15 | GO:0008143: poly(A) binding | 8.33E-04 |
| 16 | GO:0003924: GTPase activity | 1.07E-03 |
| 17 | GO:0005267: potassium channel activity | 1.09E-03 |
| 18 | GO:0005375: copper ion transmembrane transporter activity | 1.09E-03 |
| 19 | GO:0008142: oxysterol binding | 1.09E-03 |
| 20 | GO:0003729: mRNA binding | 1.77E-03 |
| 21 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.98E-03 |
| 22 | GO:0005524: ATP binding | 2.10E-03 |
| 23 | GO:0031624: ubiquitin conjugating enzyme binding | 2.14E-03 |
| 24 | GO:0004725: protein tyrosine phosphatase activity | 2.49E-03 |
| 25 | GO:0051087: chaperone binding | 2.85E-03 |
| 26 | GO:0003756: protein disulfide isomerase activity | 3.63E-03 |
| 27 | GO:0005516: calmodulin binding | 3.65E-03 |
| 28 | GO:0005525: GTP binding | 4.09E-03 |
| 29 | GO:0030276: clathrin binding | 4.25E-03 |
| 30 | GO:0010181: FMN binding | 4.47E-03 |
| 31 | GO:0016853: isomerase activity | 4.47E-03 |
| 32 | GO:0061630: ubiquitin protein ligase activity | 5.48E-03 |
| 33 | GO:0003684: damaged DNA binding | 5.60E-03 |
| 34 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 6.82E-03 |
| 35 | GO:0004683: calmodulin-dependent protein kinase activity | 7.08E-03 |
| 36 | GO:0005096: GTPase activator activity | 7.87E-03 |
| 37 | GO:0004672: protein kinase activity | 8.66E-03 |
| 38 | GO:0003697: single-stranded DNA binding | 8.96E-03 |
| 39 | GO:0050661: NADP binding | 9.82E-03 |
| 40 | GO:0008289: lipid binding | 1.07E-02 |
| 41 | GO:0004674: protein serine/threonine kinase activity | 1.09E-02 |
| 42 | GO:0035091: phosphatidylinositol binding | 1.13E-02 |
| 43 | GO:0000166: nucleotide binding | 1.37E-02 |
| 44 | GO:0015171: amino acid transmembrane transporter activity | 1.42E-02 |
| 45 | GO:0016874: ligase activity | 1.63E-02 |
| 46 | GO:0016746: transferase activity, transferring acyl groups | 1.73E-02 |
| 47 | GO:0005507: copper ion binding | 1.95E-02 |
| 48 | GO:0015144: carbohydrate transmembrane transporter activity | 2.26E-02 |
| 49 | GO:0016301: kinase activity | 2.33E-02 |
| 50 | GO:0005351: sugar:proton symporter activity | 2.46E-02 |
| 51 | GO:0008017: microtubule binding | 2.59E-02 |
| 52 | GO:0005515: protein binding | 2.67E-02 |
| 53 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.97E-02 |
| 54 | GO:0016491: oxidoreductase activity | 3.65E-02 |
| 55 | GO:0050660: flavin adenine dinucleotide binding | 3.79E-02 |
| 56 | GO:0004842: ubiquitin-protein transferase activity | 3.83E-02 |
| 57 | GO:0008270: zinc ion binding | 4.59E-02 |
| 58 | GO:0004871: signal transducer activity | 4.68E-02 |
| 59 | GO:0042803: protein homodimerization activity | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 2 | GO:0071942: XPC complex | 0.00E+00 |
| 3 | GO:0000111: nucleotide-excision repair factor 2 complex | 0.00E+00 |
| 4 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 5 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 4.60E-05 |
| 6 | GO:0045334: clathrin-coated endocytic vesicle | 4.60E-05 |
| 7 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 4.60E-05 |
| 8 | GO:0045254: pyruvate dehydrogenase complex | 1.13E-04 |
| 9 | GO:0005886: plasma membrane | 2.38E-04 |
| 10 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 2.85E-04 |
| 11 | GO:0005774: vacuolar membrane | 3.37E-04 |
| 12 | GO:0005783: endoplasmic reticulum | 3.49E-04 |
| 13 | GO:0030131: clathrin adaptor complex | 9.57E-04 |
| 14 | GO:0034045: pre-autophagosomal structure membrane | 1.09E-03 |
| 15 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.09E-03 |
| 16 | GO:0009514: glyoxysome | 1.09E-03 |
| 17 | GO:0010494: cytoplasmic stress granule | 1.22E-03 |
| 18 | GO:0030125: clathrin vesicle coat | 1.51E-03 |
| 19 | GO:0005829: cytosol | 2.06E-03 |
| 20 | GO:0005794: Golgi apparatus | 2.79E-03 |
| 21 | GO:0005905: clathrin-coated pit | 3.04E-03 |
| 22 | GO:0005770: late endosome | 4.25E-03 |
| 23 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.61E-03 |
| 24 | GO:0009504: cell plate | 4.68E-03 |
| 25 | GO:0000145: exocyst | 5.13E-03 |
| 26 | GO:0032580: Golgi cisterna membrane | 5.60E-03 |
| 27 | GO:0000932: P-body | 6.32E-03 |
| 28 | GO:0005788: endoplasmic reticulum lumen | 6.57E-03 |
| 29 | GO:0000151: ubiquitin ligase complex | 7.60E-03 |
| 30 | GO:0005643: nuclear pore | 7.60E-03 |
| 31 | GO:0005856: cytoskeleton | 1.16E-02 |
| 32 | GO:0005834: heterotrimeric G-protein complex | 1.56E-02 |
| 33 | GO:0009524: phragmoplast | 2.07E-02 |
| 34 | GO:0005802: trans-Golgi network | 2.19E-02 |
| 35 | GO:0005759: mitochondrial matrix | 2.34E-02 |
| 36 | GO:0005768: endosome | 2.50E-02 |
| 37 | GO:0005874: microtubule | 3.88E-02 |