Gene: AT2G39250
     

Gene description


TAIR ID: AT2G39250

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: -0.44

General responsiveness: 0.56

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


ethylene-activated signaling pathway, transcription, DNA-templated, multicellular organism development, regulation of transcription


GO cellular component


nucleus, nucleolus


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


12 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.526.67E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-2.133.46E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.529.47E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-2.615.24E-11
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.278.07E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.259.04E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.671.12E-15
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.733.34E-06
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.984.95E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.584.04E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.953.59E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.591.57E-03






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