gene detail

Gene description

TAIR ID: AT2G38040

Short description: acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit

Pathogen responsiveness: -1.38

General responsiveness: -1.80

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

malonyl-CoA biosynthetic process, fatty acid biosynthetic process

GO cellular component

chloroplast stroma, membrane, chloroplast envelope, chloroplast, plastid, acetyl-CoA carboxylase complex, chloroplast inner membrane

GO molecular function

acetyl-CoA carboxylase activity, ATP binding

Protein domain

Pfam	PF03255, Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit

Metabolic pathway

PWY0-1264: biotin-carboxyl carrier protein assembly
PWY-4381: fatty acid biosynthesis initiation I
PWY-5156: superpathway of fatty acid biosynthesis II (plant)

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath01212: Fatty acid metabolism
PATH:ath00620: Pyruvate metabolism
PATH:ath00640: Propanoate metabolism
PATH:ath00061: Fatty acid biosynthesis

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.74	1.83E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.63	1.08E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.64	6.47E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.53	1.07E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.56	4.59E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.54	9.40E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.61	2.30E-04