co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G38040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
3	GO:0010068: protoderm histogenesis	0.00E+00
4	GO:0046620: regulation of organ growth	4.70E-06
5	GO:0009926: auxin polar transport	1.02E-05
6	GO:0043087: regulation of GTPase activity	2.08E-05
7	GO:0043609: regulation of carbon utilization	2.08E-05
8	GO:0001736: establishment of planar polarity	5.37E-05
9	GO:0048255: mRNA stabilization	5.37E-05
10	GO:0090153: regulation of sphingolipid biosynthetic process	9.50E-05
11	GO:0006000: fructose metabolic process	9.50E-05
12	GO:0019048: modulation by virus of host morphology or physiology	1.42E-04
13	GO:0031048: chromatin silencing by small RNA	1.42E-04
14	GO:0048645: animal organ formation	1.42E-04
15	GO:0051567: histone H3-K9 methylation	1.95E-04
16	GO:0016458: gene silencing	3.11E-04
17	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.11E-04
18	GO:0006955: immune response	4.37E-04
19	GO:0009734: auxin-activated signaling pathway	4.66E-04
20	GO:0006002: fructose 6-phosphate metabolic process	5.74E-04
21	GO:0006098: pentose-phosphate shunt	6.45E-04
22	GO:0030422: production of siRNA involved in RNA interference	7.94E-04
23	GO:0048829: root cap development	7.94E-04
24	GO:0048765: root hair cell differentiation	8.71E-04
25	GO:0009725: response to hormone	1.03E-03
26	GO:0006094: gluconeogenesis	1.03E-03
27	GO:0030048: actin filament-based movement	1.03E-03
28	GO:0009451: RNA modification	1.06E-03
29	GO:0051017: actin filament bundle assembly	1.38E-03
30	GO:0003333: amino acid transmembrane transport	1.56E-03
31	GO:0016998: cell wall macromolecule catabolic process	1.56E-03
32	GO:0006306: DNA methylation	1.56E-03
33	GO:0009733: response to auxin	1.72E-03
34	GO:0042335: cuticle development	2.07E-03
35	GO:0048868: pollen tube development	2.17E-03
36	GO:0006342: chromatin silencing	2.17E-03
37	GO:0009958: positive gravitropism	2.17E-03
38	GO:0051607: defense response to virus	3.08E-03
39	GO:0001666: response to hypoxia	3.21E-03
40	GO:0009816: defense response to bacterium, incompatible interaction	3.33E-03
41	GO:0010311: lateral root formation	3.97E-03
42	GO:0006499: N-terminal protein myristoylation	4.10E-03
43	GO:0006865: amino acid transport	4.37E-03
44	GO:0006839: mitochondrial transport	4.93E-03
45	GO:0009744: response to sucrose	5.37E-03
46	GO:0051707: response to other organism	5.37E-03
47	GO:0006417: regulation of translation	7.07E-03
48	GO:0006096: glycolytic process	7.40E-03
49	GO:0048367: shoot system development	7.57E-03
50	GO:0009624: response to nematode	8.42E-03
51	GO:0009790: embryo development	1.10E-02
52	GO:0006633: fatty acid biosynthetic process	1.16E-02
53	GO:0007166: cell surface receptor signaling pathway	1.36E-02
54	GO:0009723: response to ethylene	1.87E-02
55	GO:0007275: multicellular organism development	2.00E-02
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.01E-02
57	GO:0046777: protein autophosphorylation	2.06E-02
58	GO:0015979: photosynthesis	2.16E-02
59	GO:0045892: negative regulation of transcription, DNA-templated	2.25E-02
60	GO:0055085: transmembrane transport	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
4	GO:0008158: hedgehog receptor activity	2.08E-05
5	GO:0042834: peptidoglycan binding	2.08E-05
6	GO:0035197: siRNA binding	1.42E-04
7	GO:0010011: auxin binding	1.95E-04
8	GO:0010328: auxin influx transmembrane transporter activity	1.95E-04
9	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.51E-04
10	GO:2001070: starch binding	3.11E-04
11	GO:0004332: fructose-bisphosphate aldolase activity	3.11E-04
12	GO:0004521: endoribonuclease activity	9.50E-04
13	GO:0003774: motor activity	1.11E-03
14	GO:0004872: receptor activity	2.39E-03
15	GO:0051015: actin filament binding	2.73E-03
16	GO:0004519: endonuclease activity	3.09E-03
17	GO:0005096: GTPase activator activity	3.97E-03
18	GO:0004222: metalloendopeptidase activity	4.10E-03
19	GO:0035091: phosphatidylinositol binding	5.66E-03
20	GO:0015293: symporter activity	5.81E-03
21	GO:0015171: amino acid transmembrane transporter activity	7.07E-03
22	GO:0031625: ubiquitin protein ligase binding	7.07E-03
23	GO:0003779: actin binding	8.25E-03
24	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.18E-02
25	GO:0003682: chromatin binding	1.75E-02
26	GO:0003723: RNA binding	2.00E-02
27	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.75E-02
28	GO:0004674: protein serine/threonine kinase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0005719: nuclear euchromatin	1.42E-04
3	GO:0009986: cell surface	4.37E-04
4	GO:0015030: Cajal body	7.18E-04
5	GO:0016459: myosin complex	7.94E-04
6	GO:0009574: preprophase band	1.03E-03
7	GO:0005578: proteinaceous extracellular matrix	1.03E-03
8	GO:0030095: chloroplast photosystem II	1.11E-03
9	GO:0009654: photosystem II oxygen evolving complex	1.47E-03
10	GO:0015629: actin cytoskeleton	1.76E-03
11	GO:0009505: plant-type cell wall	1.97E-03
12	GO:0019898: extrinsic component of membrane	2.39E-03
13	GO:0005743: mitochondrial inner membrane	2.65E-03
14	GO:0030529: intracellular ribonucleoprotein complex	3.21E-03
15	GO:0000151: ubiquitin ligase complex	3.84E-03
16	GO:0031977: thylakoid lumen	5.07E-03
17	GO:0005856: cytoskeleton	5.81E-03
18	GO:0005654: nucleoplasm	9.67E-03
19	GO:0009543: chloroplast thylakoid lumen	9.85E-03
20	GO:0009507: chloroplast	1.26E-02
21	GO:0046658: anchored component of plasma membrane	1.51E-02
22	GO:0009570: chloroplast stroma	1.60E-02
23	GO:0009535: chloroplast thylakoid membrane	2.28E-02
24	GO:0043231: intracellular membrane-bounded organelle	2.78E-02
25	GO:0005886: plasma membrane	4.27E-02
26	GO:0009579: thylakoid	4.43E-02
27	GO:0009534: chloroplast thylakoid	4.46E-02