Gene description
Orthologous
GO biological process
salicylic acid catabolic process, pollen development, lignin catabolic process, response to oxidative stress, drought recovery, cinnamic acid biosynthetic process, phenylpropanoid biosynthetic process, defense response, L-phenylalanine catabolic process, response to UV-B, response to karrikin, response to wounding
GO cellular component
cytoplasm
GO molecular function
phenylalanine ammonia-lyase activity
Metabolic pathway
Transcriptional regulation
Regulator:
AT5G13790, AT5G12870, AT5G11260, AT1G79180, AT2G43010, AT1G16490, AT2G47190, AT3G08500
Target:
none
Protein-protein interaction network
The number of partners (degree) is: 9 (Top20%)
Coexpression network
Differentially expressed condition
50 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE11807 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 3.75 | 3.55E-04 |
GSE11807 | Col, erf104 ko, water 4 h | Col, erf104 ko, Flg22 4 h | 1.97 | 4.79E-02 |
GSE11807 | Col, mpk6 ko, water 4 h | Col, mpk6 ko, Flg22 4 h | 2.70 | 9.19E-03 |
GSE12856 | Col, WT, control | Col, WT, Bg h | 2.62 | 5.93E-08 |
GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 2.11 | 2.77E-07 |
GSE17464 | Laer, control | Laer, Alternaria brassicicola 3 d | -2.96 | 1.65E-10 |
GSE17464 | Laer, control | Laer, PstDC3000 12 h | -2.81 | 1.16E-09 |
GSE17464 | Laer, control | Laer, Flg22 2 h | 1.79 | 4.61E-05 |
GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | -2.80 | 9.01E-10 |
GSE17464 | Penta, control | Penta, PstDC3000 12 h | -2.78 | 1.20E-09 |
GSE17464 | Penta, control | Penta, Flg22 2 h | 1.57 | 2.23E-04 |
GSE18329 | Col, WT, control | Col, WT, Hpa noco2 96 h | 2.56 | 1.83E-13 |
GSE18329 | Col, wrky72_1, control | Col, wrky72_1, Hpa noco2 96 h | 2.23 | 8.23E-13 |
GSE18329 | Col, wrky72_1, control | Col, wrky72_2, Hpa noco2 96 h | 2.15 | 1.49E-12 |
GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | -1.59 | 2.57E-08 |
GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | -1.77 | 3.13E-09 |
GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | -1.83 | 1.96E-09 |
GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | -1.61 | 1.01E-08 |
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 2.90 | 2.06E-10 |
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 2.05 | 1.05E-08 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.09 | 2.91E-11 |
GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 3.05 | 9.74E-12 |
GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 3.46 | 2.28E-12 |
GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 4.25 | 3.08E-14 |
GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 2.57 | 1.84E-10 |
GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 2.27 | 1.43E-03 |
GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 1.79 | 6.14E-07 |
GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 2.17 | 4.26E-08 |
GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 2.38 | 2.20E-06 |
GSE5520 | Col, WT, control 7 h | Col, WT, E.coli_0157_H7 7 h | 1.63 | 6.29E-04 |
GSE5520 | Col, WT, control 7 h | Col, WT, E.coli_TUV86 flic- 7 h | 1.78 | 1.66E-04 |
GSE5520 | Col, WT, control 7 h | Col, WT, hrpA- 10 h | 1.87 | 6.38E-05 |
GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 1.92 | 1.87E-05 |
GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 1.75 | 7.72E-05 |
GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 1.62 | 1.37E-04 |
GSE56094 | Col, WT, control 5 h | Col, WT, hrpA- 5 h | 2.24 | 2.71E-06 |
GSE56094 | Col, WT, control 6 h | Col, WT, hrpA- 6 h | 1.76 | 2.00E-04 |
GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.86 | 5.45E-05 |
GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | 1.64 | 2.35E-04 |
GSE56094 | Col, WT, control 9 h | Col, WT, hrpA- 9 h | 1.77 | 9.54E-05 |
GSE5615 | Col, WT, GST 4 h | Col, WT, GST+NPP1 4 h | 1.79 | 1.42E-04 |
GSE5615 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 2.59 | 3.35E-07 |
GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 2.91 | 1.73E-08 |
GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 2.02 | 6.76E-03 |
GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 HrpA- 12 h | 1.81 | 4.03E-02 |
GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | 2.95 | 1.39E-04 |
GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min | 2.57 | 7.99E-04 |
GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 2-4 h | 2.75 | 3.27E-04 |
GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | 1.96 | 5.52E-03 |
GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 90-105 min | 2.28 | 5.26E-04 |
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