gene detail

Gene description

RAP-DB: OS04G0518400

Short description: Similar to Phenylalanine ammonia-lyase (Fragment).

Orthologous

Arabidopsis:

AT2G37040

Maize:

GRMZM2G118345

Wheat:

TA.9220.3.S1_AT TA.9220.3.S1_X_AT

GO biological process

L-phenylalanine catabolic process (GO:0006559), biosynthetic process (GO:0009058)

GO cellular component

cytoplasm (GO:0005737)

GO molecular function

catalytic activity (GO:0003824), ammonia-lyase activity (GO:0016841)

Protein domain

Pfam	PF00221, Aromatic amino acid lyase

Metabolic pathway

PWY-7186: superpathway of scopolin and esculin biosynthesis
PWY1F-467: phenylpropanoid biosynthesis, initial reactions
PWY-6443: benzoate biosynthesis I (CoA-dependent, β-oxidative)
PWY-1121: suberin monomers biosynthesis
PWY-6457: trans-cinnamoyl-CoA biosynthesis

KEGG pathway

PATH:dosa00360: Phenylalanine metabolism
PATH:dosa00940: Phenylpropanoid biosynthesis

Coexpression network

GSE33411_IRBB7  view
GSE63047_T7174R  view
GSE33411_IRBB5  view
GSE16793_XOO  view
GSE16793_XOC  view
GSE33411_IR24  view

Differentially expressed condition

31 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18361	Nipponbare, Mock 6 d	Nipponbare, Magnaporthe oryzae strain Guy11 6 d	2.10	2.31E-02
GSE19239	Japonica 9804, Rxo1, control	Japonica 9804, Rxo1, X. oryzae pv. oryzicola	-2.10	1.46E-02
GSE30941	Nipponbare, Mock 24 h	Nipponbare, Magnaporthe grisea BR32 24 h	-2.01	5.55E-03
GSE30941	Nipponbare, Mock 24 h	Nipponbare, Magnaporthe grisea CL367 24 h	-1.72	1.20E-02
GSE30941	Nipponbare, Mock 24 h	Nipponbare, Magnaporthe grisea FR13 24 h	-2.11	2.69E-04
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	-1.70	4.01E-08
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 6 h	-2.56	1.72E-10
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	-2.90	7.31E-13
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	-2.05	1.10E-09
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 6 h	-2.57	1.55E-10
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	-2.77	2.26E-12
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	-2.34	5.68E-11
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 6 h	-2.66	6.19E-11
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	-2.85	9.99E-13
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	2.01	3.64E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	1.90	3.00E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	1.93	2.36E-05
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain BLS303	-1.70	3.61E-04
GSE41798	Japonica, IR18, Mock 24 h	Japonica, IR18, Magnaporthe oryzae 24 h	1.76	1.36E-02
GSE41798	Japonica, IR22, Mock 24 h	Japonica, IR22, Magnaporthe oryzae 24 h	1.69	1.47E-02
GSE62893	Nipponbare, Pia, water 1 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 1 d	6.06	4.40E-02
GSE62894	Nipponbare, Pish, water 1 d	Nipponbare, Pish, Magnaporthe oryzae Kyu77-07A 1 d	5.56	2.50E-05
GSE62894	Nipponbare, pish, water 1 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 1 d	4.08	2.04E-03
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-4.70	2.69E-06
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-2.05	2.59E-03
GSE62895	Nipponbare, Pia, water 5 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 5 d	-1.81	1.28E-02
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-2.16	1.70E-03
GSE62895	Nipponbare, pia, water 5 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 5 d	-2.10	2.90E-03
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-2.01	6.17E-04
GSE63337	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 72 h	2.10	1.14E-03
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	4.17	1.29E-02