gene detail

Gene description

TAIR ID: AT2G35620

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -0.44

General responsiveness: -1.52

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

plant-type cell wall organization, cellulose biosynthetic process, mucilage biosynthetic process involved in seed coat development, protein phosphorylation, mucilage biosynthetic process, unidimensional cell growth

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

protein serine/threonine kinase activity, ATP binding, kinase activity

Protein domain

Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF13855, Leucine rich repeat
Pfam	PF00069, Protein kinase domain
SMART	SM00369, LRR_TYP
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 21 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

11 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.96	1.31E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.43	1.15E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.26	4.06E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.71	3.56E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.63	9.35E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.59	6.53E-16
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-1.55	1.73E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.96	3.22E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.38	1.90E-06
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	-1.50	2.34E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.61	3.82E-03