co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G35620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
2	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
3	GO:0046396: D-galacturonate metabolic process	0.00E+00
4	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
5	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
6	GO:0051493: regulation of cytoskeleton organization	0.00E+00
7	GO:1901698: response to nitrogen compound	0.00E+00
8	GO:0046785: microtubule polymerization	2.26E-06
9	GO:0007623: circadian rhythm	7.06E-06
10	GO:1990542: mitochondrial transmembrane transport	3.25E-05
11	GO:0051171: regulation of nitrogen compound metabolic process	3.25E-05
12	GO:1902265: abscisic acid homeostasis	3.25E-05
13	GO:1901135: carbohydrate derivative metabolic process	3.25E-05
14	GO:0048255: mRNA stabilization	8.18E-05
15	GO:0001578: microtubule bundle formation	1.42E-04
16	GO:0031022: nuclear migration along microfilament	1.42E-04
17	GO:0006013: mannose metabolic process	1.42E-04
18	GO:0071705: nitrogen compound transport	1.42E-04
19	GO:0010255: glucose mediated signaling pathway	2.11E-04
20	GO:0009826: unidimensional cell growth	2.70E-04
21	GO:0009902: chloroplast relocation	2.85E-04
22	GO:0051322: anaphase	2.85E-04
23	GO:0071249: cellular response to nitrate	2.85E-04
24	GO:0007020: microtubule nucleation	2.85E-04
25	GO:0006564: L-serine biosynthetic process	3.65E-04
26	GO:0010315: auxin efflux	4.48E-04
27	GO:0017148: negative regulation of translation	5.36E-04
28	GO:0009903: chloroplast avoidance movement	5.36E-04
29	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	5.36E-04
30	GO:0046835: carbohydrate phosphorylation	5.36E-04
31	GO:0048528: post-embryonic root development	6.27E-04
32	GO:0009664: plant-type cell wall organization	7.02E-04
33	GO:0007155: cell adhesion	7.22E-04
34	GO:0010928: regulation of auxin mediated signaling pathway	7.22E-04
35	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.22E-04
36	GO:0006997: nucleus organization	8.20E-04
37	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.02E-03
38	GO:0010380: regulation of chlorophyll biosynthetic process	1.02E-03
39	GO:0006949: syncytium formation	1.13E-03
40	GO:0010192: mucilage biosynthetic process	1.13E-03
41	GO:0009738: abscisic acid-activated signaling pathway	1.20E-03
42	GO:0015706: nitrate transport	1.36E-03
43	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.36E-03
44	GO:0030048: actin filament-based movement	1.47E-03
45	GO:0009825: multidimensional cell growth	1.72E-03
46	GO:0010167: response to nitrate	1.72E-03
47	GO:0000162: tryptophan biosynthetic process	1.85E-03
48	GO:0010187: negative regulation of seed germination	1.99E-03
49	GO:0007166: cell surface receptor signaling pathway	2.02E-03
50	GO:0043622: cortical microtubule organization	2.12E-03
51	GO:0006012: galactose metabolic process	2.55E-03
52	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.55E-03
53	GO:0009693: ethylene biosynthetic process	2.55E-03
54	GO:0006468: protein phosphorylation	2.77E-03
55	GO:0008360: regulation of cell shape	3.15E-03
56	GO:0009958: positive gravitropism	3.15E-03
57	GO:0009851: auxin biosynthetic process	3.47E-03
58	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.47E-03
59	GO:0071554: cell wall organization or biogenesis	3.63E-03
60	GO:0007264: small GTPase mediated signal transduction	3.80E-03
61	GO:0010090: trichome morphogenesis	3.97E-03
62	GO:0009828: plant-type cell wall loosening	4.14E-03
63	GO:0000910: cytokinesis	4.49E-03
64	GO:0010029: regulation of seed germination	4.85E-03
65	GO:0030244: cellulose biosynthetic process	5.60E-03
66	GO:0008219: cell death	5.60E-03
67	GO:0009834: plant-type secondary cell wall biogenesis	5.99E-03
68	GO:0006811: ion transport	5.99E-03
69	GO:0009910: negative regulation of flower development	6.19E-03
70	GO:0009637: response to blue light	6.60E-03
71	GO:0009853: photorespiration	6.60E-03
72	GO:0009734: auxin-activated signaling pathway	6.94E-03
73	GO:0008283: cell proliferation	7.87E-03
74	GO:0051707: response to other organism	7.87E-03
75	GO:0009740: gibberellic acid mediated signaling pathway	1.19E-02
76	GO:0051726: regulation of cell cycle	1.29E-02
77	GO:0009790: embryo development	1.62E-02
78	GO:0010150: leaf senescence	1.83E-02
79	GO:0010228: vegetative to reproductive phase transition of meristem	1.89E-02
80	GO:0010468: regulation of gene expression	2.07E-02
81	GO:0006970: response to osmotic stress	2.63E-02
82	GO:0006952: defense response	2.64E-02
83	GO:0007049: cell cycle	2.70E-02
84	GO:0005975: carbohydrate metabolic process	2.70E-02
85	GO:0009723: response to ethylene	2.77E-02
86	GO:0016192: vesicle-mediated transport	3.02E-02
87	GO:0046777: protein autophosphorylation	3.05E-02
88	GO:0016042: lipid catabolic process	3.76E-02
89	GO:0048364: root development	3.96E-02
90	GO:0016310: phosphorylation	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0047912: galacturonokinase activity	0.00E+00
2	GO:0017091: AU-rich element binding	3.25E-05
3	GO:0097367: carbohydrate derivative binding	3.25E-05
4	GO:0010313: phytochrome binding	3.25E-05
5	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	8.18E-05
6	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	8.18E-05
7	GO:0015929: hexosaminidase activity	8.18E-05
8	GO:0004563: beta-N-acetylhexosaminidase activity	8.18E-05
9	GO:0004647: phosphoserine phosphatase activity	1.42E-04
10	GO:0017077: oxidative phosphorylation uncoupler activity	2.11E-04
11	GO:0048027: mRNA 5'-UTR binding	2.11E-04
12	GO:0004335: galactokinase activity	2.85E-04
13	GO:0080032: methyl jasmonate esterase activity	2.85E-04
14	GO:0004559: alpha-mannosidase activity	5.36E-04
15	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.24E-03
16	GO:0004674: protein serine/threonine kinase activity	1.25E-03
17	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.66E-03
18	GO:0008017: microtubule binding	1.85E-03
19	GO:0035251: UDP-glucosyltransferase activity	2.26E-03
20	GO:0016788: hydrolase activity, acting on ester bonds	2.77E-03
21	GO:0016301: kinase activity	3.12E-03
22	GO:0008080: N-acetyltransferase activity	3.15E-03
23	GO:0001085: RNA polymerase II transcription factor binding	3.15E-03
24	GO:0016853: isomerase activity	3.31E-03
25	GO:0019901: protein kinase binding	3.47E-03
26	GO:0004518: nuclease activity	3.80E-03
27	GO:0016413: O-acetyltransferase activity	4.49E-03
28	GO:0004721: phosphoprotein phosphatase activity	5.22E-03
29	GO:0030247: polysaccharide binding	5.22E-03
30	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	5.99E-03
31	GO:0004222: metalloendopeptidase activity	5.99E-03
32	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	6.19E-03
33	GO:0005524: ATP binding	1.08E-02
34	GO:0030246: carbohydrate binding	1.18E-02
35	GO:0022857: transmembrane transporter activity	1.19E-02
36	GO:0016757: transferase activity, transferring glycosyl groups	1.43E-02
37	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.60E-02
38	GO:0003676: nucleic acid binding	1.82E-02
39	GO:0005515: protein binding	2.09E-02
40	GO:0003682: chromatin binding	2.60E-02
41	GO:0004672: protein kinase activity	2.62E-02
42	GO:0003729: mRNA binding	2.65E-02
43	GO:0052689: carboxylic ester hydrolase activity	3.12E-02
44	GO:0004722: protein serine/threonine phosphatase activity	3.53E-02
45	GO:0046872: metal ion binding	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0070971: endoplasmic reticulum exit site	0.00E+00
2	GO:0055028: cortical microtubule	2.38E-05
3	GO:0009897: external side of plasma membrane	1.42E-04
4	GO:0072686: mitotic spindle	3.65E-04
5	GO:0005886: plasma membrane	5.06E-04
6	GO:0010005: cortical microtubule, transverse to long axis	5.36E-04
7	GO:0009574: preprophase band	1.47E-03
8	GO:0005938: cell cortex	1.47E-03
9	GO:0045271: respiratory chain complex I	2.12E-03
10	GO:0019898: extrinsic component of membrane	3.47E-03
11	GO:0031965: nuclear membrane	3.47E-03
12	GO:0005794: Golgi apparatus	3.55E-03
13	GO:0009505: plant-type cell wall	4.02E-03
14	GO:0005667: transcription factor complex	5.04E-03
15	GO:0005819: spindle	7.01E-03
16	GO:0090406: pollen tube	7.87E-03
17	GO:0005856: cytoskeleton	8.53E-03
18	GO:0031966: mitochondrial membrane	9.22E-03
19	GO:0005635: nuclear envelope	1.02E-02
20	GO:0005747: mitochondrial respiratory chain complex I	1.11E-02
21	GO:0005829: cytosol	1.33E-02
22	GO:0031225: anchored component of membrane	1.37E-02
23	GO:0005802: trans-Golgi network	1.41E-02
24	GO:0005774: vacuolar membrane	1.46E-02
25	GO:0005623: cell	1.48E-02
26	GO:0009524: phragmoplast	1.51E-02
27	GO:0005768: endosome	1.60E-02
28	GO:0009705: plant-type vacuole membrane	1.83E-02
29	GO:0046658: anchored component of plasma membrane	2.23E-02
30	GO:0005874: microtubule	2.84E-02
31	GO:0005743: mitochondrial inner membrane	3.65E-02