Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G35620

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000469: negative regulation of peroxidase activity0.00E+00
2GO:1902334: fructose export from vacuole to cytoplasm0.00E+00
3GO:0033231: carbohydrate export0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:2000121: regulation of removal of superoxide radicals0.00E+00
6GO:0033468: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
7GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
8GO:0006573: valine metabolic process0.00E+00
9GO:0090355: positive regulation of auxin metabolic process0.00E+00
10GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
11GO:0009103: lipopolysaccharide biosynthetic process0.00E+00
12GO:0009661: chromoplast organization0.00E+00
13GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
14GO:1905157: positive regulation of photosynthesis0.00E+00
15GO:0009904: chloroplast accumulation movement3.21E-05
16GO:0009903: chloroplast avoidance movement6.70E-05
17GO:0010362: negative regulation of anion channel activity by blue light1.58E-04
18GO:0015969: guanosine tetraphosphate metabolic process1.58E-04
19GO:0015755: fructose transport1.58E-04
20GO:0031426: polycistronic mRNA processing1.58E-04
21GO:0048657: anther wall tapetum cell differentiation1.58E-04
22GO:0006551: leucine metabolic process1.58E-04
23GO:0042371: vitamin K biosynthetic process1.58E-04
24GO:0046167: glycerol-3-phosphate biosynthetic process1.58E-04
25GO:0043007: maintenance of rDNA1.58E-04
26GO:0006995: cellular response to nitrogen starvation2.50E-04
27GO:0009750: response to fructose2.91E-04
28GO:0010155: regulation of proton transport3.60E-04
29GO:2000123: positive regulation of stomatal complex development3.60E-04
30GO:0006898: receptor-mediated endocytosis3.60E-04
31GO:0006650: glycerophospholipid metabolic process3.60E-04
32GO:0010541: acropetal auxin transport3.60E-04
33GO:1904143: positive regulation of carotenoid biosynthetic process3.60E-04
34GO:0006863: purine nucleobase transport5.37E-04
35GO:0046168: glycerol-3-phosphate catabolic process5.89E-04
36GO:0010160: formation of animal organ boundary5.89E-04
37GO:0006696: ergosterol biosynthetic process5.89E-04
38GO:0055114: oxidation-reduction process6.97E-04
39GO:0051260: protein homooligomerization7.18E-04
40GO:0010239: chloroplast mRNA processing8.43E-04
41GO:0043481: anthocyanin accumulation in tissues in response to UV light8.43E-04
42GO:0006072: glycerol-3-phosphate metabolic process8.43E-04
43GO:1990019: protein storage vacuole organization8.43E-04
44GO:0090308: regulation of methylation-dependent chromatin silencing8.43E-04
45GO:0048443: stamen development9.22E-04
46GO:0048442: sepal development1.12E-03
47GO:0008295: spermidine biosynthetic process1.12E-03
48GO:0031122: cytoplasmic microtubule organization1.12E-03
49GO:0006021: inositol biosynthetic process1.12E-03
50GO:0071483: cellular response to blue light1.12E-03
51GO:0009646: response to absence of light1.24E-03
52GO:0034052: positive regulation of plant-type hypersensitive response1.41E-03
53GO:0016120: carotene biosynthetic process1.41E-03
54GO:0010389: regulation of G2/M transition of mitotic cell cycle1.74E-03
55GO:0010315: auxin efflux1.74E-03
56GO:0060918: auxin transport1.74E-03
57GO:0046855: inositol phosphate dephosphorylation1.74E-03
58GO:0009643: photosynthetic acclimation1.74E-03
59GO:0010076: maintenance of floral meristem identity2.09E-03
60GO:0009082: branched-chain amino acid biosynthetic process2.09E-03
61GO:0009099: valine biosynthetic process2.09E-03
62GO:0009554: megasporogenesis2.09E-03
63GO:0009854: oxidative photosynthetic carbon pathway2.09E-03
64GO:0010019: chloroplast-nucleus signaling pathway2.09E-03
65GO:1900056: negative regulation of leaf senescence2.45E-03
66GO:0000122: negative regulation of transcription from RNA polymerase II promoter2.45E-03
67GO:0010444: guard mother cell differentiation2.45E-03
68GO:0030307: positive regulation of cell growth2.45E-03
69GO:0043068: positive regulation of programmed cell death2.84E-03
70GO:0050821: protein stabilization2.84E-03
71GO:0000105: histidine biosynthetic process2.84E-03
72GO:0009231: riboflavin biosynthetic process2.84E-03
73GO:0006811: ion transport2.90E-03
74GO:0048527: lateral root development3.04E-03
75GO:0009932: cell tip growth3.25E-03
76GO:0009097: isoleucine biosynthetic process3.25E-03
77GO:0071555: cell wall organization3.25E-03
78GO:0009637: response to blue light3.33E-03
79GO:0048507: meristem development3.67E-03
80GO:0009638: phototropism4.12E-03
81GO:0009098: leucine biosynthetic process4.12E-03
82GO:0010380: regulation of chlorophyll biosynthetic process4.12E-03
83GO:0019538: protein metabolic process4.58E-03
84GO:0048441: petal development4.58E-03
85GO:0043069: negative regulation of programmed cell death4.58E-03
86GO:0009641: shade avoidance4.58E-03
87GO:0010216: maintenance of DNA methylation5.05E-03
88GO:0000038: very long-chain fatty acid metabolic process5.05E-03
89GO:0072593: reactive oxygen species metabolic process5.05E-03
90GO:0043085: positive regulation of catalytic activity5.05E-03
91GO:0016485: protein processing5.05E-03
92GO:0008361: regulation of cell size5.55E-03
93GO:0006790: sulfur compound metabolic process5.55E-03
94GO:0009767: photosynthetic electron transport chain6.06E-03
95GO:0009785: blue light signaling pathway6.06E-03
96GO:0030048: actin filament-based movement6.06E-03
97GO:0006857: oligopeptide transport6.18E-03
98GO:0010540: basipetal auxin transport6.59E-03
99GO:0010143: cutin biosynthetic process6.59E-03
100GO:0048440: carpel development6.59E-03
101GO:0007015: actin filament organization6.59E-03
102GO:0010223: secondary shoot formation6.59E-03
103GO:0009887: animal organ morphogenesis6.59E-03
104GO:0042343: indole glucosinolate metabolic process7.13E-03
105GO:0019853: L-ascorbic acid biosynthetic process7.13E-03
106GO:0046854: phosphatidylinositol phosphorylation7.13E-03
107GO:0000162: tryptophan biosynthetic process7.69E-03
108GO:0042023: DNA endoreduplication7.69E-03
109GO:0007017: microtubule-based process8.86E-03
110GO:0098542: defense response to other organism9.46E-03
111GO:0019915: lipid storage9.46E-03
112GO:0009814: defense response, incompatible interaction1.01E-02
113GO:0019748: secondary metabolic process1.01E-02
114GO:0009294: DNA mediated transformation1.07E-02
115GO:0071369: cellular response to ethylene stimulus1.07E-02
116GO:0010584: pollen exine formation1.14E-02
117GO:0019722: calcium-mediated signaling1.14E-02
118GO:0016117: carotenoid biosynthetic process1.20E-02
119GO:0070417: cellular response to cold1.20E-02
120GO:0010268: brassinosteroid homeostasis1.34E-02
121GO:0045489: pectin biosynthetic process1.34E-02
122GO:0009958: positive gravitropism1.34E-02
123GO:0007623: circadian rhythm1.42E-02
124GO:0010150: leaf senescence1.42E-02
125GO:0009791: post-embryonic development1.48E-02
126GO:0009749: response to glucose1.48E-02
127GO:0008654: phospholipid biosynthetic process1.48E-02
128GO:0009851: auxin biosynthetic process1.48E-02
129GO:0010228: vegetative to reproductive phase transition of meristem1.49E-02
130GO:0016132: brassinosteroid biosynthetic process1.56E-02
131GO:0007264: small GTPase mediated signal transduction1.63E-02
132GO:0016125: sterol metabolic process1.78E-02
133GO:0010252: auxin homeostasis1.78E-02
134GO:0009639: response to red or far red light1.78E-02
135GO:0009555: pollen development1.79E-02
136GO:0007267: cell-cell signaling1.86E-02
137GO:0009911: positive regulation of flower development2.02E-02
138GO:0009826: unidimensional cell growth2.13E-02
139GO:0009658: chloroplast organization2.21E-02
140GO:0015995: chlorophyll biosynthetic process2.27E-02
141GO:0018298: protein-chromophore linkage2.44E-02
142GO:0000160: phosphorelay signal transduction system2.53E-02
143GO:0010311: lateral root formation2.53E-02
144GO:0009834: plant-type secondary cell wall biogenesis2.62E-02
145GO:0010218: response to far red light2.62E-02
146GO:0007568: aging2.71E-02
147GO:0009910: negative regulation of flower development2.71E-02
148GO:0010119: regulation of stomatal movement2.71E-02
149GO:0009853: photorespiration2.89E-02
150GO:0044550: secondary metabolite biosynthetic process2.98E-02
151GO:0034599: cellular response to oxidative stress2.98E-02
152GO:0008283: cell proliferation3.46E-02
153GO:0009640: photomorphogenesis3.46E-02
154GO:0009926: auxin polar transport3.46E-02
155GO:0009744: response to sucrose3.46E-02
156GO:0042546: cell wall biogenesis3.56E-02
157GO:0008643: carbohydrate transport3.66E-02
158GO:0000165: MAPK cascade3.96E-02
159GO:0006281: DNA repair4.03E-02
160GO:0006629: lipid metabolic process4.03E-02
161GO:0009408: response to heat4.03E-02
162GO:0042538: hyperosmotic salinity response4.07E-02
163GO:0006813: potassium ion transport4.28E-02
164GO:0010224: response to UV-B4.38E-02
165GO:0048367: shoot system development4.93E-02
RankGO TermAdjusted P value
1GO:0015284: fructose uniporter activity0.00E+00
2GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
3GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
4GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity0.00E+00
5GO:0046905: phytoene synthase activity0.00E+00
6GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
7GO:0005353: fructose transmembrane transporter activity1.22E-06
8GO:0000293: ferric-chelate reductase activity4.79E-05
9GO:0035671: enone reductase activity1.58E-04
10GO:0046906: tetrapyrrole binding1.58E-04
11GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.58E-04
12GO:0080132: fatty acid alpha-hydroxylase activity1.58E-04
13GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity1.58E-04
14GO:0051996: squalene synthase activity1.58E-04
15GO:0008568: microtubule-severing ATPase activity1.58E-04
16GO:0016618: hydroxypyruvate reductase activity1.58E-04
17GO:0003984: acetolactate synthase activity1.58E-04
18GO:0004328: formamidase activity1.58E-04
19GO:0003879: ATP phosphoribosyltransferase activity1.58E-04
20GO:0010347: L-galactose-1-phosphate phosphatase activity1.58E-04
21GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity3.60E-04
22GO:0004766: spermidine synthase activity3.60E-04
23GO:0052832: inositol monophosphate 3-phosphatase activity3.60E-04
24GO:0008934: inositol monophosphate 1-phosphatase activity3.60E-04
25GO:0052833: inositol monophosphate 4-phosphatase activity3.60E-04
26GO:0048531: beta-1,3-galactosyltransferase activity3.60E-04
27GO:0008728: GTP diphosphokinase activity3.60E-04
28GO:0004310: farnesyl-diphosphate farnesyltransferase activity3.60E-04
29GO:0003862: 3-isopropylmalate dehydrogenase activity3.60E-04
30GO:0080045: quercetin 3'-O-glucosyltransferase activity3.60E-04
31GO:0051119: sugar transmembrane transporter activity4.83E-04
32GO:0050734: hydroxycinnamoyltransferase activity5.89E-04
33GO:0003913: DNA photolyase activity5.89E-04
34GO:0003935: GTP cyclohydrolase II activity5.89E-04
35GO:0030267: glyoxylate reductase (NADP) activity5.89E-04
36GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity5.89E-04
37GO:0005345: purine nucleobase transmembrane transporter activity6.55E-04
38GO:0051287: NAD binding6.58E-04
39GO:0048027: mRNA 5'-UTR binding8.43E-04
40GO:0022890: inorganic cation transmembrane transporter activity8.43E-04
41GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides8.43E-04
42GO:0009882: blue light photoreceptor activity8.43E-04
43GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.41E-03
44GO:0016491: oxidoreductase activity1.43E-03
45GO:0080046: quercetin 4'-O-glucosyltransferase activity1.74E-03
46GO:0035673: oligopeptide transmembrane transporter activity1.74E-03
47GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.09E-03
48GO:0051753: mannan synthase activity2.09E-03
49GO:0004602: glutathione peroxidase activity2.09E-03
50GO:0019899: enzyme binding2.45E-03
51GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity3.25E-03
52GO:0103095: wax ester synthase activity3.25E-03
53GO:0015386: potassium:proton antiporter activity5.05E-03
54GO:0008515: sucrose transmembrane transporter activity5.05E-03
55GO:0000976: transcription regulatory region sequence-specific DNA binding5.55E-03
56GO:0015198: oligopeptide transporter activity5.55E-03
57GO:0004565: beta-galactosidase activity6.06E-03
58GO:0010329: auxin efflux transmembrane transporter activity6.06E-03
59GO:0008081: phosphoric diester hydrolase activity6.06E-03
60GO:0000155: phosphorelay sensor kinase activity6.06E-03
61GO:0003774: motor activity6.59E-03
62GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups7.04E-03
63GO:0008146: sulfotransferase activity7.13E-03
64GO:0022857: transmembrane transporter activity7.73E-03
65GO:0015079: potassium ion transmembrane transporter activity8.86E-03
66GO:0016779: nucleotidyltransferase activity1.01E-02
67GO:0030570: pectate lyase activity1.07E-02
68GO:0005506: iron ion binding1.19E-02
69GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.34E-02
70GO:0015299: solute:proton antiporter activity1.41E-02
71GO:0010181: FMN binding1.41E-02
72GO:0005355: glucose transmembrane transporter activity1.41E-02
73GO:0016722: oxidoreductase activity, oxidizing metal ions1.86E-02
74GO:0016597: amino acid binding1.94E-02
75GO:0000287: magnesium ion binding2.17E-02
76GO:0020037: heme binding2.42E-02
77GO:0019825: oxygen binding2.80E-02
78GO:0052689: carboxylic ester hydrolase activity3.03E-02
79GO:0005525: GTP binding3.34E-02
80GO:0004185: serine-type carboxypeptidase activity3.46E-02
81GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.54E-02
82GO:0003777: microtubule motor activity4.60E-02
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Gene type



Gene DE type