Gene: AT2G34940
     

Gene description


TAIR ID: AT2G34940

Short description: VACUOLAR SORTING RECEPTOR 5

Pathogen responsiveness: -0.33

General responsiveness: -1.15

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein transport, protein targeting to vacuole


GO cellular component


late endosome membrane, Golgi apparatus, clathrin-coated vesicle membrane, Golgi membrane, integral component of plasma membrane, integral component of membrane, Golgi transport complex


GO molecular function


calcium ion binding


Protein domain


PfamPF02225, PA domain
SMARTSM00179, EGF_CA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G20180, AT3G20770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.681.08E-06
GSE17464Penta, controlPenta, PstDC3000 12 h2.017.13E-07
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.673.00E-05
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d1.503.80E-02
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.623.85E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.604.19E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.516.55E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.278.14E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.788.30E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.985.77E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.851.82E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.472.37E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.067.92E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.931.59E-11
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h1.741.98E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.681.75E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.793.61E-04
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d1.542.41E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.115.67E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.981.00E-03






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