co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34940

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:0005993: trehalose catabolic process	0.00E+00
5	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.11E-04
6	GO:1903648: positive regulation of chlorophyll catabolic process	1.54E-04
7	GO:0000077: DNA damage checkpoint	1.54E-04
8	GO:0042350: GDP-L-fucose biosynthetic process	1.54E-04
9	GO:1990641: response to iron ion starvation	1.54E-04
10	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.54E-04
11	GO:0050691: regulation of defense response to virus by host	1.54E-04
12	GO:1902065: response to L-glutamate	1.54E-04
13	GO:0080183: response to photooxidative stress	3.51E-04
14	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.51E-04
15	GO:0040020: regulation of meiotic nuclear division	3.51E-04
16	GO:0009812: flavonoid metabolic process	3.51E-04
17	GO:0006101: citrate metabolic process	3.51E-04
18	GO:0006065: UDP-glucuronate biosynthetic process	5.75E-04
19	GO:0015783: GDP-fucose transport	5.75E-04
20	GO:0009410: response to xenobiotic stimulus	5.75E-04
21	GO:0052546: cell wall pectin metabolic process	5.75E-04
22	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	5.75E-04
23	GO:0055070: copper ion homeostasis	8.23E-04
24	GO:0055089: fatty acid homeostasis	8.23E-04
25	GO:0051639: actin filament network formation	8.23E-04
26	GO:0009226: nucleotide-sugar biosynthetic process	8.23E-04
27	GO:0071323: cellular response to chitin	8.23E-04
28	GO:0009306: protein secretion	8.91E-04
29	GO:0051764: actin crosslink formation	1.09E-03
30	GO:0022622: root system development	1.09E-03
31	GO:0006097: glyoxylate cycle	1.38E-03
32	GO:0009229: thiamine diphosphate biosynthetic process	1.38E-03
33	GO:0009228: thiamine biosynthetic process	1.70E-03
34	GO:0006906: vesicle fusion	2.18E-03
35	GO:0010044: response to aluminum ion	2.39E-03
36	GO:2000014: regulation of endosperm development	2.39E-03
37	GO:1900057: positive regulation of leaf senescence	2.39E-03
38	GO:0006333: chromatin assembly or disassembly	2.39E-03
39	GO:0045010: actin nucleation	2.77E-03
40	GO:0031540: regulation of anthocyanin biosynthetic process	2.77E-03
41	GO:0006102: isocitrate metabolic process	2.77E-03
42	GO:0016559: peroxisome fission	2.77E-03
43	GO:0007155: cell adhesion	2.77E-03
44	GO:1900150: regulation of defense response to fungus	2.77E-03
45	GO:0007275: multicellular organism development	2.94E-03
46	GO:0045087: innate immune response	3.21E-03
47	GO:0000902: cell morphogenesis	3.58E-03
48	GO:0015780: nucleotide-sugar transport	3.58E-03
49	GO:0007338: single fertilization	3.58E-03
50	GO:0010332: response to gamma radiation	3.58E-03
51	GO:0008202: steroid metabolic process	4.01E-03
52	GO:0009086: methionine biosynthetic process	4.01E-03
53	GO:0015031: protein transport	4.63E-03
54	GO:0006913: nucleocytoplasmic transport	4.92E-03
55	GO:0019684: photosynthesis, light reaction	4.92E-03
56	GO:0031347: regulation of defense response	4.99E-03
57	GO:0000266: mitochondrial fission	5.41E-03
58	GO:0045037: protein import into chloroplast stroma	5.41E-03
59	GO:0030036: actin cytoskeleton organization	5.91E-03
60	GO:0018107: peptidyl-threonine phosphorylation	5.91E-03
61	GO:0002237: response to molecule of bacterial origin	6.42E-03
62	GO:0007034: vacuolar transport	6.42E-03
63	GO:0007015: actin filament organization	6.42E-03
64	GO:0070588: calcium ion transmembrane transport	6.95E-03
65	GO:0007030: Golgi organization	6.95E-03
66	GO:0009901: anther dehiscence	6.95E-03
67	GO:0000162: tryptophan biosynthetic process	7.49E-03
68	GO:0034976: response to endoplasmic reticulum stress	7.49E-03
69	GO:0006636: unsaturated fatty acid biosynthetic process	7.49E-03
70	GO:0009863: salicylic acid mediated signaling pathway	8.05E-03
71	GO:0080147: root hair cell development	8.05E-03
72	GO:0051017: actin filament bundle assembly	8.05E-03
73	GO:0006289: nucleotide-excision repair	8.05E-03
74	GO:0006334: nucleosome assembly	9.22E-03
75	GO:0048278: vesicle docking	9.22E-03
76	GO:0071456: cellular response to hypoxia	9.82E-03
77	GO:0009814: defense response, incompatible interaction	9.82E-03
78	GO:0010197: polar nucleus fusion	1.31E-02
79	GO:0009960: endosperm development	1.31E-02
80	GO:0061025: membrane fusion	1.37E-02
81	GO:0006623: protein targeting to vacuole	1.44E-02
82	GO:0071554: cell wall organization or biogenesis	1.52E-02
83	GO:0006891: intra-Golgi vesicle-mediated transport	1.52E-02
84	GO:0006470: protein dephosphorylation	1.57E-02
85	GO:0009738: abscisic acid-activated signaling pathway	1.64E-02
86	GO:0008380: RNA splicing	1.64E-02
87	GO:0009567: double fertilization forming a zygote and endosperm	1.74E-02
88	GO:0071805: potassium ion transmembrane transport	1.81E-02
89	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.05E-02
90	GO:0010029: regulation of seed germination	2.05E-02
91	GO:0009816: defense response to bacterium, incompatible interaction	2.05E-02
92	GO:0046686: response to cadmium ion	2.24E-02
93	GO:0000724: double-strand break repair via homologous recombination	2.72E-02
94	GO:0010200: response to chitin	2.73E-02
95	GO:0006099: tricarboxylic acid cycle	2.90E-02
96	GO:0006887: exocytosis	3.18E-02
97	GO:0006897: endocytosis	3.18E-02
98	GO:0006631: fatty acid metabolic process	3.18E-02
99	GO:0006886: intracellular protein transport	3.26E-02
100	GO:0010114: response to red light	3.37E-02
101	GO:0051707: response to other organism	3.37E-02
102	GO:0000209: protein polyubiquitination	3.47E-02
103	GO:0008643: carbohydrate transport	3.56E-02
104	GO:0009751: response to salicylic acid	3.83E-02
105	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.86E-02
106	GO:0009408: response to heat	3.89E-02
107	GO:0009846: pollen germination	3.96E-02
108	GO:0006351: transcription, DNA-templated	4.03E-02
109	GO:0006813: potassium ion transport	4.17E-02
110	GO:0010224: response to UV-B	4.27E-02
111	GO:0006857: oligopeptide transport	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0034338: short-chain carboxylesterase activity	0.00E+00
2	GO:0004555: alpha,alpha-trehalase activity	0.00E+00
3	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0061133: endopeptidase activator activity	0.00E+00
6	GO:0004656: procollagen-proline 4-dioxygenase activity	6.42E-05
7	GO:0050577: GDP-L-fucose synthase activity	1.54E-04
8	GO:0015927: trehalase activity	1.54E-04
9	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.54E-04
10	GO:0003994: aconitate hydratase activity	3.51E-04
11	GO:0032934: sterol binding	3.51E-04
12	GO:0031418: L-ascorbic acid binding	5.74E-04
13	GO:0005457: GDP-fucose transmembrane transporter activity	5.75E-04
14	GO:0003979: UDP-glucose 6-dehydrogenase activity	5.75E-04
15	GO:0000975: regulatory region DNA binding	5.75E-04
16	GO:0035529: NADH pyrophosphatase activity	8.23E-04
17	GO:0030527: structural constituent of chromatin	8.23E-04
18	GO:0004834: tryptophan synthase activity	1.09E-03
19	GO:0070628: proteasome binding	1.09E-03
20	GO:0047631: ADP-ribose diphosphatase activity	1.38E-03
21	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.38E-03
22	GO:0004623: phospholipase A2 activity	1.38E-03
23	GO:0000210: NAD+ diphosphatase activity	1.70E-03
24	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.77E-03
25	GO:0008142: oxysterol binding	3.16E-03
26	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.21E-03
27	GO:0000149: SNARE binding	3.50E-03
28	GO:0003682: chromatin binding	4.11E-03
29	GO:0005484: SNAP receptor activity	4.13E-03
30	GO:0030234: enzyme regulator activity	4.46E-03
31	GO:0051287: NAD binding	4.99E-03
32	GO:0015198: oligopeptide transporter activity	5.41E-03
33	GO:0005388: calcium-transporting ATPase activity	5.91E-03
34	GO:0008061: chitin binding	6.95E-03
35	GO:0003712: transcription cofactor activity	6.95E-03
36	GO:0022857: transmembrane transporter activity	7.45E-03
37	GO:0043130: ubiquitin binding	8.05E-03
38	GO:0015079: potassium ion transmembrane transporter activity	8.63E-03
39	GO:0004707: MAP kinase activity	9.22E-03
40	GO:0005102: receptor binding	1.17E-02
41	GO:0008565: protein transporter activity	1.19E-02
42	GO:0015297: antiporter activity	1.31E-02
43	GO:0016853: isomerase activity	1.37E-02
44	GO:0050662: coenzyme binding	1.37E-02
45	GO:0051015: actin filament binding	1.66E-02
46	GO:0042802: identical protein binding	1.74E-02
47	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.81E-02
48	GO:0016413: O-acetyltransferase activity	1.89E-02
49	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.95E-02
50	GO:0004806: triglyceride lipase activity	2.21E-02
51	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.38E-02
52	GO:0046872: metal ion binding	2.51E-02
53	GO:0004222: metalloendopeptidase activity	2.55E-02
54	GO:0051539: 4 iron, 4 sulfur cluster binding	3.09E-02
55	GO:0042803: protein homodimerization activity	3.31E-02
56	GO:0004722: protein serine/threonine phosphatase activity	3.46E-02
57	GO:0051537: 2 iron, 2 sulfur cluster binding	3.56E-02
58	GO:0043565: sequence-specific DNA binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0032432: actin filament bundle	8.23E-04
2	GO:0030658: transport vesicle membrane	8.23E-04
3	GO:0016272: prefoldin complex	2.03E-03
4	GO:0005885: Arp2/3 protein complex	2.03E-03
5	GO:0016021: integral component of membrane	2.12E-03
6	GO:0005794: Golgi apparatus	3.42E-03
7	GO:0031201: SNARE complex	3.81E-03
8	GO:0031902: late endosome membrane	3.81E-03
9	GO:0030665: clathrin-coated vesicle membrane	4.01E-03
10	GO:0008540: proteasome regulatory particle, base subcomplex	4.01E-03
11	GO:0017119: Golgi transport complex	4.46E-03
12	GO:0008541: proteasome regulatory particle, lid subcomplex	4.92E-03
13	GO:0005884: actin filament	4.92E-03
14	GO:0005789: endoplasmic reticulum membrane	6.38E-03
15	GO:0005795: Golgi stack	6.95E-03
16	GO:0005802: trans-Golgi network	8.10E-03
17	GO:0005774: vacuolar membrane	8.91E-03
18	GO:0005741: mitochondrial outer membrane	9.22E-03
19	GO:0005768: endosome	9.84E-03
20	GO:0009543: chloroplast thylakoid lumen	9.92E-03
21	GO:0005783: endoplasmic reticulum	1.32E-02
22	GO:0016592: mediator complex	1.59E-02
23	GO:0000785: chromatin	1.59E-02
24	GO:0005778: peroxisomal membrane	1.81E-02
25	GO:0000139: Golgi membrane	1.82E-02
26	GO:0005788: endoplasmic reticulum lumen	2.05E-02
27	GO:0000325: plant-type vacuole	2.64E-02
28	GO:0005622: intracellular	3.51E-02
29	GO:0016020: membrane	3.53E-02
30	GO:0000502: proteasome complex	4.17E-02
31	GO:0005681: spliceosomal complex	4.69E-02
32	GO:0016607: nuclear speck	4.80E-02