Gene: AT2G33800
     

Gene description


TAIR ID: AT2G33800

Short description: Ribosomal protein S5 family protein

Pathogen responsiveness: -0.04

General responsiveness: 1.62

Orthologous


Rice:

OS03G0452300  

Maize:

GRMZM2G025855  

Wheat: No orthologous gene

GO biological process


plastid translation, response to cold, translation, adaxial/abaxial pattern specification, chloroplast rRNA processing, response to cadmium ion


GO cellular component


chloroplast thylakoid, membrane, mitochondrial small ribosomal subunit, chloroplast stroma, intracellular, chloroplast thylakoid membrane, ribosome, thylakoid, chloroplast, nucleus


GO molecular function


response to cold, rRNA binding, structural constituent of ribosome


Protein domain


PfamPF00333, Ribosomal protein S5, N-terminal domain
PfamPF03719, Ribosomal protein S5, C-terminal domain

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.719.39E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.131.07E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.884.06E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.559.99E-10
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.971.39E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.268.47E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.706.79E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.922.41E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.911.21E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.715.86E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.955.62E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.693.40E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.263.35E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.552.45E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.751.31E-09
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.513.37E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.852.04E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.182.07E-13
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.651.47E-08
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.562.64E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.583.30E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.842.68E-06






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