gene detail

Gene description

TAIR ID: AT2G31880

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: 0.80

General responsiveness: -0.37

Orthologous

Rice:

OS06G0288100

Maize:

GRMZM2G027958

Wheat:

TA.15243.1.S1_AT

GO biological process

protein phosphorylation, negative regulation of floral organ abscission, positive regulation of defense response, positive regulation of cell death, defense response, transmembrane receptor protein tyrosine kinase signaling pathway

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein tyrosine kinase activity, kinase activity, ATP binding, protein binding

Protein domain

Pfam	PF13855, Leucine rich repeat
Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT4G18770, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 30 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

36 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	3.10	3.99E-02
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.65	7.86E-06
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	2.41	2.25E-09
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	1.69	9.47E-06
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	2.85	1.69E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.35	1.97E-02
GSE18329	Col, WT, control	Col, WT, Hpa noco2 96 h	2.26	4.86E-13
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	2.85	7.04E-15
GSE18329	Col, wrky72_1, control	Col, wrky72_2, Hpa noco2 96 h	2.56	3.57E-14
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	3.05	1.54E-07
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	2.83	3.16E-07
GSE37921	Col, WT, control	Col, WT, CMV	1.98	2.09E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.56	3.32E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.48	3.56E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.73	1.50E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	3.46	4.23E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.28	1.79E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.86	4.94E-13
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	2.53	6.24E-11
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.97	2.86E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	3.12	1.06E-12
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	2.61	5.69E-11
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	2.35	1.83E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.29	7.27E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.44	2.74E-09
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.63	1.30E-05
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.88	6.51E-07
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	1.70	7.89E-04
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	2.05	7.71E-07
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	1.92	4.28E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	3.22	1.23E-06
GSE73351	Ws-4, map65_3, control	Ws-4, map65_3, H.ara Emwa1 3 d	1.83	2.06E-02
GSE8319	Col, WT, control	Col, WT, chitooctaose 30 min	2.17	7.93E-14
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	1.57	6.93E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.87	5.17E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.77	8.16E-03