Gene: AT2G28050
     


Gene description


TAIR ID: AT2G28050

Short description: Pentatricopeptide repeat (PPR) superfamily protein

Pathogen responsiveness: -2.07

General responsiveness: -4.69

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


mitochondrial mRNA 5'-end processing, RNA modification


GO cellular component


mitochondrion


GO molecular function


endonuclease activity, RNA binding


Protein domain


PfamPF13041, PPR repeat family
PfamPF01535, PPR repeat

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT3G16857, AT4G16110, AT1G24260

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network


No coexpression gene


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.963.48E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.286.12E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.827.58E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV-1.782.48E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.593.83E-03






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