gene detail

Gene description

TAIR ID: AT2G27200

Short description: P-loop containing nucleoside triphosphate hydrolases superfamily protein

Pathogen responsiveness: -0.81

General responsiveness: -1.52

Orthologous

Rice:

OS12G0618300

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ribosome biogenesis

GO cellular component

nucleus, cytosol

GO molecular function

GTP binding, GTPase activity

Protein domain

Pfam	PF01926, 50S ribosome-binding GTPase

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03008: Ribosome biogenesis in eukaryotes

Transcriptional regulation

Regulator:
AT3G14230, AT4G18770

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.63	1.87E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.48	2.56E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	2.38	8.81E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	2.22	3.44E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	2.02	1.42E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.68	1.28E-02
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.62	2.08E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.60	3.26E-11
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.66	5.96E-03

Showing 1 to 9 of 9 entries

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