Gene description
GO biological process
defense response to bacterium, regulation of transcription, DNA-templated, transcription, response to chitin
GO cellular component
nucleus
GO molecular function
transcription factor activity, sequence-specific DNA binding
Protein domain
Pfam | PF03106, WRKY DNA -binding domain |
Pfam | PF10533, Plant zinc cluster domain |
SMART | SM00774, WRKY |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
Regulator:
AT2G20180, AT4G31550
Target:
AT3G45140, AT2G40750, AT4G31550, AT5G42650, AT3G56400
Protein-protein interaction network
The number of partners (degree) is: 9 (Top20%)
Coexpression network
Differentially expressed condition
36 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE11807 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 4.27 | 6.02E-03 |
GSE11807 | Col, mpk6 ko, water 4 h | Col, mpk6 ko, Flg22 4 h | 3.63 | 3.55E-02 |
GSE16472 | Col, WT, Flg22 0 min | Col, WT, Flg22 30 min | 5.36 | 2.99E-02 |
GSE16472 | Col, WT, Flg22 0 min | Col, WT, Flg22 60min | 5.51 | 3.02E-02 |
GSE17382 | Col, WT, Flg22 0 min | Col, WT, Flg22 60min | 2.20 | 1.33E-02 |
GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 1 h | 1.70 | 2.13E-03 |
GSE17464 | Laer, control | Laer, Flg22 1 h | 2.80 | 1.07E-07 |
GSE17464 | Laer, control | Laer, Flg22 2 h | 2.19 | 1.98E-05 |
GSE17464 | Penta, control | Penta, Flg22 2 h | 2.84 | 7.55E-08 |
GSE17464 | Penta, control | Penta, Flg22 2 h | 2.25 | 1.19E-05 |
GSE2538 | Col, WT, control | Col, WT, crab shell chitin 30 min | 1.72 | 1.03E-04 |
GSE2538 | Col, WT, control | Col, WT, purified chitin octamer 30 min | 1.68 | 1.35E-04 |
GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 2.16 | 7.31E-10 |
GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 2.35 | 1.98E-10 |
GSE5520 | Col, WT, control 10 h | Col, WT, Cor- hrpS- 10 h | 1.64 | 1.70E-02 |
GSE5520 | Col, WT, control 7 h | Col, WT, E.coli_0157_H7 7 h | 1.89 | 2.46E-03 |
GSE5520 | Col, WT, control 7 h | Col, WT, E.coli_TUV86 flic- 7 h | 1.92 | 1.51E-03 |
GSE5520 | Col, WT, control 7 h | Col, WT, hrpA- 10 h | 1.60 | 8.94E-03 |
GSE56094 | Col, WT, control 2 h | Col, WT, hrpA- 2 h | 1.97 | 1.15E-13 |
GSE56094 | Col, WT, control 3 h | Col, WT, hrpA- 3 h | 2.12 | 4.25E-15 |
GSE56094 | Col, WT, control 4 h | Col, WT, PstDC3000 4 h | 1.65 | 2.26E-10 |
GSE56094 | Col, WT, control 5 h | Col, WT, hrpA- 5 h | 1.51 | 3.54E-09 |
GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.67 | 1.92E-10 |
GSE5615 | Col, WT, GST 1 h | Col, WT, GST+NPP1 1 h | 1.58 | 1.60E-04 |
GSE5615 | Col, WT, GST 4 h | Col, WT, GST+NPP1 4 h | 1.55 | 3.70E-05 |
GSE5615 | Col, WT, water 1 h | Col, WT, Flg22 1 h | 2.71 | 9.71E-09 |
GSE5615 | Col, WT, water 1 h | Col, WT, HrpZ 1 h | 2.51 | 3.20E-08 |
GSE5615 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 3.32 | 1.31E-11 |
GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 2.62 | 1.06E-09 |
GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 HrpA- 12 h | 1.74 | 1.93E-05 |
GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 AvrRpm1 4 h | 2.25 | 3.73E-06 |
GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 HrpA- 4 h | 2.33 | 7.08E-06 |
GSE6176 | Col, WT, control 4 h | Col, WT, PstDC3000 4 h | 2.20 | 2.39E-05 |
GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | 1.69 | 2.84E-02 |
GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min | 2.10 | 1.77E-02 |
GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 90-105 min | 1.87 | 9.22E-03 |
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