gene detail

Gene description

TAIR ID: AT2G18950

Short description: homogentisate phytyltransferase 1

Pathogen responsiveness: -0.71

General responsiveness: -0.22

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G048472

Wheat:

TA.28314.1.S1_AT

GO biological process

vitamin E biosynthetic process, regulation of defense response, cell wall organization, fat-soluble vitamin biosynthetic process, unsaturated fatty acid biosynthetic process, phloem sucrose loading, response to temperature stimulus

GO cellular component

integral component of membrane, chloroplast membrane, chloroplast, plasma membrane

GO molecular function

homogentisate phytyltransferase activity, prenyltransferase activity, transferase activity, transferring alkyl or aryl (other than methyl) groups

Protein domain

Pfam	PF01040, UbiA prenyltransferase family

Metabolic pathway

PWY-1422: vitamin E biosynthesis

KEGG pathway

PATH:ath00130: Ubiquinone and other terpenoid-quinone biosynthesis

Transcriptional regulation

Regulator:
AT1G24260, AT2G43010, AT1G76890

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.17	5.00E-11
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.56	1.60E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	1.69	8.70E-04
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.72	6.70E-04
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.68	8.56E-07
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.69	1.83E-07
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.74	1.18E-06
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	3.44	7.37E-06