Gene: AT2G18300
     

Gene description


TAIR ID: AT2G18300

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: 1.11

General responsiveness: 2.71

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


brassinosteroid mediated signaling pathway, regulation of transcription, DNA-templated, mRNA transcription, gibberellic acid mediated signaling pathway, transcription, response to hormone, response to cytokinin, regulation of growth, unidimensional cell growth


GO cellular component


nucleus


GO molecular function


DNA binding, transcription factor activity, sequence-specific DNA binding, protein binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


31 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-2.139.15E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h-2.156.46E-06
GSE17464Laer, GA+Flg22 0 hLaer, GA+Flg22 2 h1.972.23E-02
GSE17464Laer, JA+GA+Flg22 0 hLaer, JA+GA+Flg22 2 h2.171.46E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d3.164.97E-07
GSE17464Penta, controlPenta, Flg22 2 h-3.292.89E-07
GSE17464Penta, controlPenta, Flg22 2 h-2.721.63E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.271.28E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.052.03E-03
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.436.69E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-5.343.65E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.328.55E-06
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h-1.651.39E-03
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h-1.856.49E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.223.69E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.267.13E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-4.068.43E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.125.06E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.712.29E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.471.55E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.986.71E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.703.99E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-4.037.05E-16
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-2.461.33E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-4.024.02E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.611.57E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-4.007.72E-04
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.211.18E-03
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h-1.504.21E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.649.28E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.531.51E-02






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