Gene: AT2G16870
     

Gene description


TAIR ID: AT2G16870

Short description: Disease resistance protein (TIR-NBS-LRR class) family

Pathogen responsiveness: -1.10

General responsiveness: -4.67

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, signal transduction


GO cellular component


unkown


GO molecular function


ADP binding


Protein domain


PfamPF01582, TIR domain
PfamPF07725, Leucine Rich Repeat
PfamPF00931, NB-ARC domain
SMARTSM00255, TIR
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G14230, AT1G24260, AT4G36990, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.743.30E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.912.04E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.557.41E-04
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.812.28E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.584.71E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.596.73E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.547.38E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.819.88E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.642.76E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.522.44E-04
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.969.36E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.528.40E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.834.62E-04






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