Gene: AT2G16280
     

Gene description


TAIR ID: AT2G16280

Short description: 3-ketoacyl-CoA synthase 9

Pathogen responsiveness: -0.66

General responsiveness: 0.08

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


fatty acid biosynthetic process, very long-chain fatty acid metabolic process, response to cold, cuticle development, response to light stimulus


GO cellular component


endoplasmic reticulum membrane, integral component of membrane, nucleus


GO molecular function


very-long-chain 3-ketoacyl-CoA synthase activity, 3-oxo-arachidoyl-CoA synthase activity, 3-oxo-cerotoyl-CoA synthase activity, 3-oxo-lignoceronyl-CoA synthase activity


Protein domain


PfamPF08392, FAE1/Type III polyketide synthase-like protein
PfamPF08541, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

Transcriptional regulation


Regulator:
AT5G13790, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


9 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.602.37E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.542.09E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.862.23E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.706.37E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.088.51E-06
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.935.31E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.611.57E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.602.46E-12
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.594.16E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.