Gene: AT2G05160
Gene description
TAIR ID: AT2G05160
Short description: CCCH-type zinc fingerfamily protein with RNA-binding domain
Pathogen responsiveness: -0.39
General responsiveness: -1.25
GO biological process
biological_process
GO cellular component
nucleus
GO molecular function
RNA binding, metal ion binding, nuclease activity, DNA binding
Protein domain
| Pfam | PF12872, OST-HTH/LOTUS domain |
| Pfam | PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
| SMART | SM00360, RRM |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
14 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, WT, control | Col, WT, Bg h | -1.73 | 2.93E-07 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | -1.75 | 1.80E-07 |
| GSE17464 | Laer, GA+Flg22 0 h | Laer, GA+Flg22 2 h | 2.27 | 2.51E-02 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | -1.80 | 1.21E-02 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | -1.68 | 1.64E-02 |
| GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | -2.06 | 4.41E-03 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -2.59 | 2.82E-04 |
| GSE17464 | Penta, control | Penta, Flg22 2 h | -1.78 | 1.08E-02 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | -2.06 | 1.67E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | -1.57 | 2.49E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | -1.90 | 7.49E-03 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | -1.63 | 2.03E-02 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 EV | -1.84 | 1.90E-02 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.02 | 1.18E-11 |
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