co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G05160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0031222: arabinan catabolic process	0.00E+00
2	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
3	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
4	GO:0090627: plant epidermal cell differentiation	0.00E+00
5	GO:0009606: tropism	0.00E+00
6	GO:0045184: establishment of protein localization	0.00E+00
7	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
8	GO:0080127: fruit septum development	0.00E+00
9	GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
10	GO:0046620: regulation of organ growth	1.77E-11
11	GO:0009733: response to auxin	5.19E-07
12	GO:0009734: auxin-activated signaling pathway	7.66E-07
13	GO:0009926: auxin polar transport	6.17E-06
14	GO:0009657: plastid organization	2.99E-05
15	GO:0009913: epidermal cell differentiation	2.51E-04
16	GO:0042793: transcription from plastid promoter	2.51E-04
17	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.15E-04
18	GO:0006436: tryptophanyl-tRNA aminoacylation	4.45E-04
19	GO:0015904: tetracycline transport	4.45E-04
20	GO:0034757: negative regulation of iron ion transport	4.45E-04
21	GO:0042659: regulation of cell fate specification	4.45E-04
22	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	4.45E-04
23	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	4.45E-04
24	GO:0090558: plant epidermis development	4.45E-04
25	GO:1903866: palisade mesophyll development	4.45E-04
26	GO:0010063: positive regulation of trichoblast fate specification	4.45E-04
27	GO:0035987: endodermal cell differentiation	4.45E-04
28	GO:0007389: pattern specification process	6.60E-04
29	GO:0040008: regulation of growth	7.25E-04
30	GO:0000902: cell morphogenesis	7.90E-04
31	GO:0009451: RNA modification	8.20E-04
32	GO:0010583: response to cyclopentenone	8.89E-04
33	GO:1900865: chloroplast RNA modification	9.32E-04
34	GO:0031425: chloroplast RNA processing	9.32E-04
35	GO:2000123: positive regulation of stomatal complex development	9.61E-04
36	GO:1902326: positive regulation of chlorophyll biosynthetic process	9.61E-04
37	GO:0010569: regulation of double-strand break repair via homologous recombination	9.61E-04
38	GO:2000039: regulation of trichome morphogenesis	9.61E-04
39	GO:0010271: regulation of chlorophyll catabolic process	9.61E-04
40	GO:0018026: peptidyl-lysine monomethylation	9.61E-04
41	GO:0071497: cellular response to freezing	9.61E-04
42	GO:0009662: etioplast organization	9.61E-04
43	GO:1900033: negative regulation of trichome patterning	9.61E-04
44	GO:1904143: positive regulation of carotenoid biosynthetic process	9.61E-04
45	GO:0080009: mRNA methylation	9.61E-04
46	GO:0010252: auxin homeostasis	1.04E-03
47	GO:0009828: plant-type cell wall loosening	1.04E-03
48	GO:0009416: response to light stimulus	1.25E-03
49	GO:0010027: thylakoid membrane organization	1.30E-03
50	GO:0045037: protein import into chloroplast stroma	1.43E-03
51	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.57E-03
52	GO:0090708: specification of plant organ axis polarity	1.57E-03
53	GO:0080117: secondary growth	1.57E-03
54	GO:0090391: granum assembly	1.57E-03
55	GO:0006518: peptide metabolic process	1.57E-03
56	GO:0042780: tRNA 3'-end processing	1.57E-03
57	GO:0001578: microtubule bundle formation	1.57E-03
58	GO:0048481: plant ovule development	1.82E-03
59	GO:1902476: chloride transmembrane transport	2.27E-03
60	GO:0010071: root meristem specification	2.27E-03
61	GO:0051513: regulation of monopolar cell growth	2.27E-03
62	GO:0010239: chloroplast mRNA processing	2.27E-03
63	GO:0010306: rhamnogalacturonan II biosynthetic process	2.27E-03
64	GO:0016556: mRNA modification	2.27E-03
65	GO:0051289: protein homotetramerization	2.27E-03
66	GO:1901141: regulation of lignin biosynthetic process	3.05E-03
67	GO:0006479: protein methylation	3.05E-03
68	GO:0048629: trichome patterning	3.05E-03
69	GO:0042274: ribosomal small subunit biogenesis	3.05E-03
70	GO:0051322: anaphase	3.05E-03
71	GO:0006221: pyrimidine nucleotide biosynthetic process	3.05E-03
72	GO:0030104: water homeostasis	3.05E-03
73	GO:2000038: regulation of stomatal complex development	3.05E-03
74	GO:0046656: folic acid biosynthetic process	3.05E-03
75	GO:0006021: inositol biosynthetic process	3.05E-03
76	GO:0009107: lipoate biosynthetic process	3.90E-03
77	GO:0016123: xanthophyll biosynthetic process	3.90E-03
78	GO:0010375: stomatal complex patterning	3.90E-03
79	GO:0080110: sporopollenin biosynthetic process	3.90E-03
80	GO:0048497: maintenance of floral organ identity	3.90E-03
81	GO:0009664: plant-type cell wall organization	4.56E-03
82	GO:0010087: phloem or xylem histogenesis	4.69E-03
83	GO:0010405: arabinogalactan protein metabolic process	4.83E-03
84	GO:0016554: cytidine to uridine editing	4.83E-03
85	GO:0006655: phosphatidylglycerol biosynthetic process	4.83E-03
86	GO:0010315: auxin efflux	4.83E-03
87	GO:1902456: regulation of stomatal opening	4.83E-03
88	GO:0048831: regulation of shoot system development	4.83E-03
89	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.83E-03
90	GO:0003006: developmental process involved in reproduction	4.83E-03
91	GO:0050665: hydrogen peroxide biosynthetic process	4.83E-03
92	GO:0009741: response to brassinosteroid	5.06E-03
93	GO:0010305: leaf vascular tissue pattern formation	5.06E-03
94	GO:2000067: regulation of root morphogenesis	5.83E-03
95	GO:0071470: cellular response to osmotic stress	5.83E-03
96	GO:1901259: chloroplast rRNA processing	5.83E-03
97	GO:0009942: longitudinal axis specification	5.83E-03
98	GO:0048509: regulation of meristem development	5.83E-03
99	GO:0046654: tetrahydrofolate biosynthetic process	5.83E-03
100	GO:0009854: oxidative photosynthetic carbon pathway	5.83E-03
101	GO:0048825: cotyledon development	5.84E-03
102	GO:0071554: cell wall organization or biogenesis	6.25E-03
103	GO:0009826: unidimensional cell growth	6.58E-03
104	GO:0007050: cell cycle arrest	6.89E-03
105	GO:0048437: floral organ development	6.89E-03
106	GO:0006821: chloride transport	6.89E-03
107	GO:0015937: coenzyme A biosynthetic process	6.89E-03
108	GO:0009396: folic acid-containing compound biosynthetic process	6.89E-03
109	GO:0030307: positive regulation of cell growth	6.89E-03
110	GO:0010103: stomatal complex morphogenesis	6.89E-03
111	GO:0009658: chloroplast organization	6.97E-03
112	GO:0000105: histidine biosynthetic process	8.02E-03
113	GO:0001522: pseudouridine synthesis	8.02E-03
114	GO:0048766: root hair initiation	8.02E-03
115	GO:0055075: potassium ion homeostasis	8.02E-03
116	GO:0006357: regulation of transcription from RNA polymerase II promoter	8.04E-03
117	GO:0010204: defense response signaling pathway, resistance gene-independent	9.21E-03
118	GO:0007275: multicellular organism development	9.89E-03
119	GO:0048507: meristem development	1.05E-02
120	GO:0000373: Group II intron splicing	1.05E-02
121	GO:0010411: xyloglucan metabolic process	1.07E-02
122	GO:0009638: phototropism	1.18E-02
123	GO:0042761: very long-chain fatty acid biosynthetic process	1.18E-02
124	GO:2000280: regulation of root development	1.18E-02
125	GO:0000160: phosphorelay signal transduction system	1.25E-02
126	GO:0009790: embryo development	1.27E-02
127	GO:0045036: protein targeting to chloroplast	1.31E-02
128	GO:0006949: syncytium formation	1.31E-02
129	GO:0006259: DNA metabolic process	1.31E-02
130	GO:0006535: cysteine biosynthetic process from serine	1.31E-02
131	GO:0010015: root morphogenesis	1.46E-02
132	GO:0006265: DNA topological change	1.46E-02
133	GO:0034599: cellular response to oxidative stress	1.58E-02
134	GO:0006790: sulfur compound metabolic process	1.60E-02
135	GO:0016024: CDP-diacylglycerol biosynthetic process	1.60E-02
136	GO:0010582: floral meristem determinacy	1.60E-02
137	GO:0009767: photosynthetic electron transport chain	1.75E-02
138	GO:0010588: cotyledon vascular tissue pattern formation	1.75E-02
139	GO:2000012: regulation of auxin polar transport	1.75E-02
140	GO:0030048: actin filament-based movement	1.75E-02
141	GO:0009785: blue light signaling pathway	1.75E-02
142	GO:0009691: cytokinin biosynthetic process	1.75E-02
143	GO:0009739: response to gibberellin	1.82E-02
144	GO:0048467: gynoecium development	1.91E-02
145	GO:0010207: photosystem II assembly	1.91E-02
146	GO:0042546: cell wall biogenesis	2.03E-02
147	GO:0080188: RNA-directed DNA methylation	2.07E-02
148	GO:0090351: seedling development	2.07E-02
149	GO:0046854: phosphatidylinositol phosphorylation	2.07E-02
150	GO:0006833: water transport	2.24E-02
151	GO:0019344: cysteine biosynthetic process	2.41E-02
152	GO:0080147: root hair cell development	2.41E-02
153	GO:0010073: meristem maintenance	2.59E-02
154	GO:0051302: regulation of cell division	2.59E-02
155	GO:0019953: sexual reproduction	2.59E-02
156	GO:0006418: tRNA aminoacylation for protein translation	2.59E-02
157	GO:0009736: cytokinin-activated signaling pathway	2.63E-02
158	GO:0016998: cell wall macromolecule catabolic process	2.77E-02
159	GO:0031348: negative regulation of defense response	2.95E-02
160	GO:0071215: cellular response to abscisic acid stimulus	3.14E-02
161	GO:0010082: regulation of root meristem growth	3.14E-02
162	GO:0048367: shoot system development	3.21E-02
163	GO:0048316: seed development	3.21E-02
164	GO:0010584: pollen exine formation	3.33E-02
165	GO:0042127: regulation of cell proliferation	3.33E-02
166	GO:0070417: cellular response to cold	3.53E-02
167	GO:0005975: carbohydrate metabolic process	3.59E-02
168	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.72E-02
169	GO:0010118: stomatal movement	3.73E-02
170	GO:0000226: microtubule cytoskeleton organization	3.73E-02
171	GO:0080022: primary root development	3.73E-02
172	GO:0008033: tRNA processing	3.73E-02
173	GO:0009958: positive gravitropism	3.94E-02
174	GO:0006662: glycerol ether metabolic process	3.94E-02
175	GO:0048868: pollen tube development	3.94E-02
176	GO:0009742: brassinosteroid mediated signaling pathway	3.96E-02
177	GO:0007059: chromosome segregation	4.14E-02
178	GO:0009646: response to absence of light	4.14E-02
179	GO:0048544: recognition of pollen	4.14E-02
180	GO:0007018: microtubule-based movement	4.14E-02
181	GO:0009851: auxin biosynthetic process	4.36E-02
182	GO:0008654: phospholipid biosynthetic process	4.36E-02
183	GO:0080156: mitochondrial mRNA modification	4.57E-02
184	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.57E-02
185	GO:0032502: developmental process	4.79E-02
186	GO:0009630: gravitropism	4.79E-02
187	GO:0019761: glucosinolate biosynthetic process	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0070009: serine-type aminopeptidase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0004401: histidinol-phosphatase activity	0.00E+00
5	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
6	GO:0001872: (1->3)-beta-D-glucan binding	6.54E-05
7	GO:0004519: endonuclease activity	9.26E-05
8	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.45E-04
9	GO:0004016: adenylate cyclase activity	4.45E-04
10	GO:0004632: phosphopantothenate--cysteine ligase activity	4.45E-04
11	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	4.45E-04
12	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	4.45E-04
13	GO:0004156: dihydropteroate synthase activity	4.45E-04
14	GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	4.45E-04
15	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	4.45E-04
16	GO:0016274: protein-arginine N-methyltransferase activity	4.45E-04
17	GO:0052381: tRNA dimethylallyltransferase activity	4.45E-04
18	GO:0004830: tryptophan-tRNA ligase activity	4.45E-04
19	GO:0003723: RNA binding	6.30E-04
20	GO:0009672: auxin:proton symporter activity	9.32E-04
21	GO:0016415: octanoyltransferase activity	9.61E-04
22	GO:0052832: inositol monophosphate 3-phosphatase activity	9.61E-04
23	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	9.61E-04
24	GO:0008805: carbon-monoxide oxygenase activity	9.61E-04
25	GO:0008934: inositol monophosphate 1-phosphatase activity	9.61E-04
26	GO:0008493: tetracycline transporter activity	9.61E-04
27	GO:0052833: inositol monophosphate 4-phosphatase activity	9.61E-04
28	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	9.61E-04
29	GO:0009884: cytokinin receptor activity	9.61E-04
30	GO:0017118: lipoyltransferase activity	9.61E-04
31	GO:0017150: tRNA dihydrouridine synthase activity	1.57E-03
32	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.57E-03
33	GO:0016805: dipeptidase activity	1.57E-03
34	GO:0005034: osmosensor activity	1.57E-03
35	GO:0010329: auxin efflux transmembrane transporter activity	1.62E-03
36	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.27E-03
37	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.27E-03
38	GO:0009041: uridylate kinase activity	2.27E-03
39	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.27E-03
40	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.30E-03
41	GO:0004930: G-protein coupled receptor activity	3.05E-03
42	GO:0005253: anion channel activity	3.05E-03
43	GO:0008891: glycolate oxidase activity	3.05E-03
44	GO:0046556: alpha-L-arabinofuranosidase activity	3.05E-03
45	GO:0016279: protein-lysine N-methyltransferase activity	3.05E-03
46	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.40E-03
47	GO:0004888: transmembrane signaling receptor activity	3.90E-03
48	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.90E-03
49	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.11E-03
50	GO:0005247: voltage-gated chloride channel activity	4.83E-03
51	GO:0004605: phosphatidate cytidylyltransferase activity	4.83E-03
52	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.83E-03
53	GO:0004124: cysteine synthase activity	5.83E-03
54	GO:0008195: phosphatidate phosphatase activity	5.83E-03
55	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	5.83E-03
56	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.83E-03
57	GO:0004656: procollagen-proline 4-dioxygenase activity	5.83E-03
58	GO:0019900: kinase binding	5.83E-03
59	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.25E-03
60	GO:0004650: polygalacturonase activity	6.98E-03
61	GO:0016413: O-acetyltransferase activity	8.56E-03
62	GO:0008173: RNA methyltransferase activity	9.21E-03
63	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	9.21E-03
64	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.07E-02
65	GO:0030247: polysaccharide binding	1.07E-02
66	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.23E-02
67	GO:0004222: metalloendopeptidase activity	1.31E-02
68	GO:0004673: protein histidine kinase activity	1.31E-02
69	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.51E-02
70	GO:0031072: heat shock protein binding	1.75E-02
71	GO:0000155: phosphorelay sensor kinase activity	1.75E-02
72	GO:0009982: pseudouridine synthase activity	1.75E-02
73	GO:0003725: double-stranded RNA binding	1.75E-02
74	GO:0004022: alcohol dehydrogenase (NAD) activity	1.75E-02
75	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.80E-02
76	GO:0043565: sequence-specific DNA binding	1.90E-02
77	GO:0003774: motor activity	1.91E-02
78	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.91E-02
79	GO:0043621: protein self-association	2.11E-02
80	GO:0003677: DNA binding	2.11E-02
81	GO:0031418: L-ascorbic acid binding	2.41E-02
82	GO:0043424: protein histidine kinase binding	2.59E-02
83	GO:0008408: 3'-5' exonuclease activity	2.77E-02
84	GO:0030570: pectate lyase activity	3.14E-02
85	GO:0004812: aminoacyl-tRNA ligase activity	3.53E-02
86	GO:0047134: protein-disulfide reductase activity	3.53E-02
87	GO:0001085: RNA polymerase II transcription factor binding	3.94E-02
88	GO:0004527: exonuclease activity	3.94E-02
89	GO:0008026: ATP-dependent helicase activity	3.96E-02
90	GO:0004791: thioredoxin-disulfide reductase activity	4.14E-02
91	GO:0010181: FMN binding	4.14E-02
92	GO:0050662: coenzyme binding	4.14E-02
93	GO:0019901: protein kinase binding	4.36E-02
94	GO:0044212: transcription regulatory region DNA binding	4.37E-02
95	GO:0019843: rRNA binding	4.67E-02
96	GO:0004871: signal transducer activity	4.71E-02