gene detail

Gene description

RAP-DB: OS08G0126700

Short description: Nucleotide-binding, alpha-beta plait domain containing protein.

Orthologous

Arabidopsis:

AT2G05160

Maize:

GRMZM2G148090

Wheat: No orthologous

GO biological process

unknown

GO cellular component

unknown

GO molecular function

nucleotide binding (GO:0000166), nucleic acid binding (GO:0003676), zinc ion binding (GO:0008270)

Protein domain

Pfam	PF12872, OST-HTH/LOTUS domain
Pfam	PF00642, Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62894_S_77  view
GSE33411_IRBB7  view
GSE33411_IRBB5  view
GSE62893_S_15B  view
GSE16793_XOO  view
GSE33411_IR24  view

Differentially expressed condition

20 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 12 h	-3.67	2.22E-09
GSE33411	IR24, control	IR24, Xanthomonas oryzae pv. oryzae 3 h	-2.25	1.82E-05
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 12 h	-3.28	2.20E-08
GSE33411	IRBB5, control	IRBB5, Xanthomonas oryzae pv. oryzae 3 h	-2.07	6.55E-05
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 12 h	-2.59	1.55E-06
GSE33411	IRBB7, control	IRBB7, Xanthomonas oryzae pv. oryzae 3 h	-1.78	4.16E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO86	-2.85	2.93E-03
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain _PXO99A	-3.68	7.47E-05
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME1	-2.30	1.34E-02
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99AME5	-3.35	2.54E-04
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain PXO99A_2	-2.93	1.21E-03
GSE36272	IR24, MOCK	IR24, Xanthomonas oryzae strain T7174	-2.76	4.93E-03
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain PXO99AME7	-2.62	1.89E-02
GSE36272	Nipponbare, MOCK	Nipponbare, Xanthomonas oryzae strain T7174	-3.66	1.17E-04
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.91	3.29E-02
GSE62895	Nipponbare, Pia, water 3 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 3 d	-1.57	1.10E-03
GSE62895	Nipponbare, pia, water 3 d	Nipponbare, pia, Magnaporthe oryzae P91-15B 3 d	-1.73	5.19E-04
GSE63047	Nipponbare, water 7 d	Nipponbare, Xanthomonas oryzae T7174R 7 d	-3.75	1.81E-03
GSE63337	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 0 h	Nipponbare, Osaba1_1, Xanthomonas oryzae pv. Oryzae PXO99 72 h	-3.33	2.51E-04
GSE7256	Nipponbare, Mock 4 d	Nipponbare, Magnaporthe grisea FR13 5 d	-2.25	3.34E-03