gene detail

Gene description

TAIR ID: AT2G02080

Short description: indeterminate(ID)-domain 4

Pathogen responsiveness: -1.03

General responsiveness: 0.53

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

root development, regulation of transcription, DNA-templated, transcription, asymmetric cell division

GO cellular component

nucleus, chloroplast

GO molecular function

DNA binding, transcription factor activity, sequence-specific DNA binding, metal ion binding

Protein domain

Pfam	PF13912, C2H2-type zinc finger
SMART	SM00355, ZnF_C2H2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.50	4.09E-06
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	2.21	1.60E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.69	1.50E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.48	1.64E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.91	3.55E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.76	1.01E-12
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.59	3.20E-03