co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046677: response to antibiotic	0.00E+00
2	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
3	GO:0071311: cellular response to acetate	0.00E+00
4	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
5	GO:0015970: guanosine tetraphosphate biosynthetic process	0.00E+00
6	GO:0071260: cellular response to mechanical stimulus	0.00E+00
7	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
8	GO:0009877: nodulation	0.00E+00
9	GO:0007623: circadian rhythm	2.26E-05
10	GO:0009637: response to blue light	4.15E-05
11	GO:0015812: gamma-aminobutyric acid transport	5.03E-05
12	GO:0010362: negative regulation of anion channel activity by blue light	5.03E-05
13	GO:0050992: dimethylallyl diphosphate biosynthetic process	1.23E-04
14	GO:0010155: regulation of proton transport	1.23E-04
15	GO:0003333: amino acid transmembrane transport	1.54E-04
16	GO:0071230: cellular response to amino acid stimulus	2.11E-04
17	GO:0090153: regulation of sphingolipid biosynthetic process	2.11E-04
18	GO:0070417: cellular response to cold	2.22E-04
19	GO:0044211: CTP salvage	3.09E-04
20	GO:0044206: UMP salvage	4.15E-04
21	GO:0015846: polyamine transport	4.15E-04
22	GO:0000003: reproduction	4.15E-04
23	GO:2000306: positive regulation of photomorphogenesis	4.15E-04
24	GO:0043097: pyrimidine nucleoside salvage	5.26E-04
25	GO:0009904: chloroplast accumulation movement	5.26E-04
26	GO:0016123: xanthophyll biosynthetic process	5.26E-04
27	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	5.26E-04
28	GO:0015995: chlorophyll biosynthetic process	5.46E-04
29	GO:0018298: protein-chromophore linkage	6.02E-04
30	GO:0006206: pyrimidine nucleobase metabolic process	6.44E-04
31	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.44E-04
32	GO:0045962: positive regulation of development, heterochronic	6.44E-04
33	GO:0033962: cytoplasmic mRNA processing body assembly	7.68E-04
34	GO:0009903: chloroplast avoidance movement	7.68E-04
35	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	7.68E-04
36	GO:0010114: response to red light	9.61E-04
37	GO:0010078: maintenance of root meristem identity	1.03E-03
38	GO:0050821: protein stabilization	1.03E-03
39	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.17E-03
40	GO:0009827: plant-type cell wall modification	1.17E-03
41	GO:0055114: oxidation-reduction process	1.42E-03
42	GO:0009638: phototropism	1.47E-03
43	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.47E-03
44	GO:0009688: abscisic acid biosynthetic process	1.63E-03
45	GO:0030148: sphingolipid biosynthetic process	1.79E-03
46	GO:0046856: phosphatidylinositol dephosphorylation	1.79E-03
47	GO:0006816: calcium ion transport	1.79E-03
48	GO:0009785: blue light signaling pathway	2.14E-03
49	GO:0018107: peptidyl-threonine phosphorylation	2.14E-03
50	GO:0009887: animal organ morphogenesis	2.32E-03
51	GO:0009416: response to light stimulus	2.53E-03
52	GO:0009768: photosynthesis, light harvesting in photosystem I	3.08E-03
53	GO:0006874: cellular calcium ion homeostasis	3.08E-03
54	GO:0048511: rhythmic process	3.29E-03
55	GO:0019722: calcium-mediated signaling	3.93E-03
56	GO:0034220: ion transmembrane transport	4.37E-03
57	GO:0008360: regulation of cell shape	4.60E-03
58	GO:0010182: sugar mediated signaling pathway	4.60E-03
59	GO:0006814: sodium ion transport	4.83E-03
60	GO:0009723: response to ethylene	5.46E-03
61	GO:0044550: secondary metabolite biosynthetic process	6.36E-03
62	GO:0015979: photosynthesis	6.68E-03
63	GO:0000160: phosphorelay signal transduction system	8.53E-03
64	GO:0006629: lipid metabolic process	8.64E-03
65	GO:0010218: response to far red light	8.82E-03
66	GO:0010119: regulation of stomatal movement	9.12E-03
67	GO:0006865: amino acid transport	9.42E-03
68	GO:0009965: leaf morphogenesis	1.26E-02
69	GO:0009555: pollen development	1.54E-02
70	GO:0009909: regulation of flower development	1.54E-02
71	GO:0035556: intracellular signal transduction	1.62E-02
72	GO:0009620: response to fungus	1.73E-02
73	GO:0009624: response to nematode	1.84E-02
74	GO:0018105: peptidyl-serine phosphorylation	1.88E-02
75	GO:0016310: phosphorylation	1.93E-02
76	GO:0009058: biosynthetic process	2.24E-02
77	GO:0010150: leaf senescence	2.72E-02
78	GO:0010228: vegetative to reproductive phase transition of meristem	2.81E-02
79	GO:0009651: response to salt stress	2.86E-02
80	GO:0009658: chloroplast organization	3.71E-02
81	GO:0006970: response to osmotic stress	3.91E-02
82	GO:0007049: cell cycle	4.01E-02
83	GO:0006355: regulation of transcription, DNA-templated	4.14E-02
84	GO:0048366: leaf development	4.17E-02
85	GO:0080167: response to karrikin	4.32E-02
86	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.43E-02
87	GO:0046777: protein autophosphorylation	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
2	GO:0015276: ligand-gated ion channel activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
5	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0052631: sphingolipid delta-8 desaturase activity	5.03E-05
8	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	5.03E-05
9	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	5.03E-05
10	GO:0008158: hedgehog receptor activity	5.03E-05
11	GO:0008066: glutamate receptor activity	5.03E-05
12	GO:0008728: GTP diphosphokinase activity	1.23E-04
13	GO:0015180: L-alanine transmembrane transporter activity	1.23E-04
14	GO:0080045: quercetin 3'-O-glucosyltransferase activity	1.23E-04
15	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.11E-04
16	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.26E-04
17	GO:0015181: arginine transmembrane transporter activity	3.09E-04
18	GO:0015203: polyamine transmembrane transporter activity	3.09E-04
19	GO:0009882: blue light photoreceptor activity	3.09E-04
20	GO:0015189: L-lysine transmembrane transporter activity	3.09E-04
21	GO:0004845: uracil phosphoribosyltransferase activity	4.15E-04
22	GO:0005313: L-glutamate transmembrane transporter activity	4.15E-04
23	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	5.26E-04
24	GO:0051538: 3 iron, 4 sulfur cluster binding	5.26E-04
25	GO:0080046: quercetin 4'-O-glucosyltransferase activity	6.44E-04
26	GO:0004849: uridine kinase activity	7.68E-04
27	GO:0015293: symporter activity	1.07E-03
28	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.17E-03
29	GO:0003843: 1,3-beta-D-glucan synthase activity	1.17E-03
30	GO:0071949: FAD binding	1.32E-03
31	GO:0015171: amino acid transmembrane transporter activity	1.41E-03
32	GO:0015174: basic amino acid transmembrane transporter activity	1.47E-03
33	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.63E-03
34	GO:0047372: acylglycerol lipase activity	1.79E-03
35	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.96E-03
36	GO:0008081: phosphoric diester hydrolase activity	2.14E-03
37	GO:0004022: alcohol dehydrogenase (NAD) activity	2.14E-03
38	GO:0005315: inorganic phosphate transmembrane transporter activity	2.14E-03
39	GO:0000155: phosphorelay sensor kinase activity	2.14E-03
40	GO:0005262: calcium channel activity	2.14E-03
41	GO:0004565: beta-galactosidase activity	2.14E-03
42	GO:0005217: intracellular ligand-gated ion channel activity	2.50E-03
43	GO:0004970: ionotropic glutamate receptor activity	2.50E-03
44	GO:0004190: aspartic-type endopeptidase activity	2.50E-03
45	GO:0031409: pigment binding	2.69E-03
46	GO:0015297: antiporter activity	2.93E-03
47	GO:0008514: organic anion transmembrane transporter activity	3.93E-03
48	GO:0010181: FMN binding	4.83E-03
49	GO:0016853: isomerase activity	4.83E-03
50	GO:0004497: monooxygenase activity	5.85E-03
51	GO:0005506: iron ion binding	6.06E-03
52	GO:0016168: chlorophyll binding	7.12E-03
53	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	8.82E-03
54	GO:0016301: kinase activity	9.74E-03
55	GO:0004672: protein kinase activity	1.01E-02
56	GO:0051537: 2 iron, 2 sulfur cluster binding	1.23E-02
57	GO:0035091: phosphatidylinositol binding	1.23E-02
58	GO:0004674: protein serine/threonine kinase activity	1.30E-02
59	GO:0016787: hydrolase activity	1.63E-02
60	GO:0046872: metal ion binding	1.67E-02
61	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.73E-02
62	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.73E-02
63	GO:0019825: oxygen binding	2.19E-02
64	GO:0015144: carbohydrate transmembrane transporter activity	2.46E-02
65	GO:0005525: GTP binding	2.53E-02
66	GO:0005351: sugar:proton symporter activity	2.67E-02
67	GO:0008194: UDP-glycosyltransferase activity	2.95E-02
68	GO:0042802: identical protein binding	3.23E-02
69	GO:0008168: methyltransferase activity	3.61E-02
70	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.79E-02
71	GO:0005524: ATP binding	4.05E-02
72	GO:0008233: peptidase activity	4.27E-02
73	GO:0003729: mRNA binding	4.62E-02
74	GO:0020037: heme binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0010287: plastoglobule	2.03E-04
2	GO:0030660: Golgi-associated vesicle membrane	4.15E-04
3	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	4.15E-04
4	GO:0009898: cytoplasmic side of plasma membrane	4.15E-04
5	GO:0009535: chloroplast thylakoid membrane	8.71E-04
6	GO:0009986: cell surface	8.97E-04
7	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.03E-03
8	GO:0000148: 1,3-beta-D-glucan synthase complex	1.17E-03
9	GO:0005765: lysosomal membrane	1.79E-03
10	GO:0009706: chloroplast inner membrane	1.80E-03
11	GO:0042651: thylakoid membrane	3.08E-03
12	GO:0009941: chloroplast envelope	3.17E-03
13	GO:0009534: chloroplast thylakoid	3.21E-03
14	GO:0009522: photosystem I	4.83E-03
15	GO:0009507: chloroplast	4.86E-03
16	GO:0009523: photosystem II	5.07E-03
17	GO:0000932: P-body	6.85E-03
18	GO:0005887: integral component of plasma membrane	1.17E-02
19	GO:0031966: mitochondrial membrane	1.37E-02
20	GO:0010008: endosome membrane	1.65E-02
21	GO:0016021: integral component of membrane	1.73E-02
22	GO:0009579: thylakoid	1.84E-02
23	GO:0009536: plastid	3.82E-02
24	GO:0031969: chloroplast membrane	4.32E-02
25	GO:0005829: cytosol	4.40E-02