gene detail

Gene description

TAIR ID: AT1G78100

Short description: F-box family protein

Pathogen responsiveness: -0.46

General responsiveness: -0.11

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

basipetal auxin transport, cytokinin-activated signaling pathway, protein ubiquitination, acropetal auxin transport

GO cellular component

nucleus, plasmodesma

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 10 (Top20%)

Coexpression network

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.81	1.77E-10
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.71	2.84E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.77	7.13E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.61	1.89E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.89	2.94E-11
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.06	7.73E-19
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.02	1.10E-17
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.36	5.69E-22
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	-1.62	1.28E-11
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.52	6.41E-12
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.14	1.59E-03
GSE62537	Col, WT, control 48 h	Col, WT, V.longisporum 48 h	-1.97	1.63E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.62	3.56E-03