Gene: AT1G73870
     

Gene description


TAIR ID: AT1G73870

Short description: B-box type zinc finger protein with CCT domain

Pathogen responsiveness: 1.13

General responsiveness: 2.39

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription, DNA-templated, regulation of transcription, secondary shoot formation, shade avoidance


GO cellular component


nucleolus, nucleus


GO molecular function


zinc ion binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF06203, CCT motif
PfamPF00643, B-box zinc finger
SMARTSM00336, BBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-1.532.68E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.873.30E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.743.73E-02
GSE17464Penta, controlPenta, Flg22 2 h-1.742.74E-02
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.648.64E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-4.671.28E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-6.205.25E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-5.181.71E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-4.705.69E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.181.44E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-3.312.87E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.061.98E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.273.45E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-3.567.16E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.215.82E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.484.10E-12
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.972.98E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-3.249.41E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.441.73E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.751.64E-03
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.786.77E-20
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.157.05E-13
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-3.221.61E-23
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-3.325.20E-25
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.502.70E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.131.38E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.854.28E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.