co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G73870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010243: response to organonitrogen compound	0.00E+00
2	GO:0015843: methylammonium transport	0.00E+00
3	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:0015882: L-ascorbic acid transport	0.00E+00
6	GO:0009644: response to high light intensity	1.71E-07
7	GO:0007623: circadian rhythm	3.39E-06
8	GO:0071483: cellular response to blue light	5.57E-06
9	GO:0010114: response to red light	5.71E-06
10	GO:0009416: response to light stimulus	1.50E-05
11	GO:0015979: photosynthesis	2.35E-05
12	GO:0009645: response to low light intensity stimulus	2.79E-05
13	GO:0009769: photosynthesis, light harvesting in photosystem II	2.79E-05
14	GO:0015995: chlorophyll biosynthetic process	5.59E-05
15	GO:0018298: protein-chromophore linkage	6.55E-05
16	GO:0010218: response to far red light	7.58E-05
17	GO:0010028: xanthophyll cycle	7.58E-05
18	GO:0051775: response to redox state	7.58E-05
19	GO:0071277: cellular response to calcium ion	7.58E-05
20	GO:0009637: response to blue light	9.35E-05
21	GO:0009658: chloroplast organization	1.40E-04
22	GO:0043496: regulation of protein homodimerization activity	1.81E-04
23	GO:0016122: xanthophyll metabolic process	1.81E-04
24	GO:0042754: negative regulation of circadian rhythm	1.81E-04
25	GO:0042853: L-alanine catabolic process	1.81E-04
26	GO:0009915: phloem sucrose loading	1.81E-04
27	GO:0042548: regulation of photosynthesis, light reaction	1.81E-04
28	GO:0006898: receptor-mediated endocytosis	1.81E-04
29	GO:0009409: response to cold	1.88E-04
30	GO:0009585: red, far-red light phototransduction	2.06E-04
31	GO:0009768: photosynthesis, light harvesting in photosystem I	2.44E-04
32	GO:0009269: response to desiccation	2.70E-04
33	GO:0015696: ammonium transport	4.41E-04
34	GO:2001141: regulation of RNA biosynthetic process	4.41E-04
35	GO:0071484: cellular response to light intensity	4.41E-04
36	GO:0006107: oxaloacetate metabolic process	4.41E-04
37	GO:0006734: NADH metabolic process	5.87E-04
38	GO:0009765: photosynthesis, light harvesting	5.87E-04
39	GO:0015994: chlorophyll metabolic process	5.87E-04
40	GO:0072488: ammonium transmembrane transport	5.87E-04
41	GO:0010117: photoprotection	7.44E-04
42	GO:0009904: chloroplast accumulation movement	7.44E-04
43	GO:0009643: photosynthetic acclimation	9.07E-04
44	GO:0009903: chloroplast avoidance movement	1.08E-03
45	GO:0010189: vitamin E biosynthetic process	1.08E-03
46	GO:0009648: photoperiodism	1.08E-03
47	GO:0071470: cellular response to osmotic stress	1.08E-03
48	GO:0006811: ion transport	1.10E-03
49	GO:0046686: response to cadmium ion	1.19E-03
50	GO:0009704: de-etiolation	1.46E-03
51	GO:0009932: cell tip growth	1.66E-03
52	GO:0071482: cellular response to light stimulus	1.66E-03
53	GO:0009657: plastid organization	1.66E-03
54	GO:0048574: long-day photoperiodism, flowering	1.66E-03
55	GO:0090333: regulation of stomatal closure	1.87E-03
56	GO:0098656: anion transmembrane transport	1.87E-03
57	GO:0006098: pentose-phosphate shunt	1.87E-03
58	GO:0009638: phototropism	2.09E-03
59	GO:0009970: cellular response to sulfate starvation	2.32E-03
60	GO:0006995: cellular response to nitrogen starvation	2.32E-03
61	GO:0006352: DNA-templated transcription, initiation	2.56E-03
62	GO:0016485: protein processing	2.56E-03
63	GO:0009773: photosynthetic electron transport in photosystem I	2.56E-03
64	GO:0009624: response to nematode	3.03E-03
65	GO:0006108: malate metabolic process	3.06E-03
66	GO:0006094: gluconeogenesis	3.06E-03
67	GO:0009767: photosynthetic electron transport chain	3.06E-03
68	GO:0005986: sucrose biosynthetic process	3.06E-03
69	GO:0010207: photosystem II assembly	3.32E-03
70	GO:0007015: actin filament organization	3.32E-03
71	GO:0009266: response to temperature stimulus	3.32E-03
72	GO:0042343: indole glucosinolate metabolic process	3.59E-03
73	GO:0006071: glycerol metabolic process	3.86E-03
74	GO:0080147: root hair cell development	4.15E-03
75	GO:0007017: microtubule-based process	4.43E-03
76	GO:0006810: transport	4.73E-03
77	GO:0098542: defense response to other organism	4.73E-03
78	GO:0019748: secondary metabolic process	5.03E-03
79	GO:0010017: red or far-red light signaling pathway	5.03E-03
80	GO:0055114: oxidation-reduction process	5.99E-03
81	GO:0006606: protein import into nucleus	6.31E-03
82	GO:0019252: starch biosynthetic process	7.34E-03
83	GO:0071805: potassium ion transmembrane transport	9.17E-03
84	GO:0008219: cell death	1.20E-02
85	GO:0045454: cell redox homeostasis	1.20E-02
86	GO:0006979: response to oxidative stress	1.24E-02
87	GO:0009853: photorespiration	1.42E-02
88	GO:0009733: response to auxin	1.42E-02
89	GO:0034599: cellular response to oxidative stress	1.46E-02
90	GO:0006099: tricarboxylic acid cycle	1.46E-02
91	GO:0006631: fatty acid metabolic process	1.60E-02
92	GO:0042542: response to hydrogen peroxide	1.65E-02
93	GO:0031347: regulation of defense response	1.94E-02
94	GO:0006364: rRNA processing	2.10E-02
95	GO:0006813: potassium ion transport	2.10E-02
96	GO:0009909: regulation of flower development	2.25E-02
97	GO:0006417: regulation of translation	2.25E-02
98	GO:0006096: glycolytic process	2.36E-02
99	GO:0006396: RNA processing	2.75E-02
100	GO:0045893: positive regulation of transcription, DNA-templated	3.02E-02
101	GO:0009058: biosynthetic process	3.28E-02
102	GO:0042744: hydrogen peroxide catabolic process	3.47E-02
103	GO:0016036: cellular response to phosphate starvation	3.78E-02
104	GO:0009739: response to gibberellin	4.31E-02
105	GO:0010468: regulation of gene expression	4.51E-02

Rank	GO Term	Adjusted P value
1	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
2	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
3	GO:0035798: 2-alkenal reductase (NADP+) activity	0.00E+00
4	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
5	GO:0009976: tocopherol cyclase activity	0.00E+00
6	GO:0033840: NDP-glucose-starch glucosyltransferase activity	0.00E+00
7	GO:0000293: ferric-chelate reductase activity	1.43E-05
8	GO:0016168: chlorophyll binding	4.73E-05
9	GO:0008746: NAD(P)+ transhydrogenase activity	7.58E-05
10	GO:0035671: enone reductase activity	7.58E-05
11	GO:0004451: isocitrate lyase activity	7.58E-05
12	GO:0047958: glycine:2-oxoglutarate aminotransferase activity	7.58E-05
13	GO:0031409: pigment binding	1.97E-04
14	GO:0050307: sucrose-phosphate phosphatase activity	3.05E-04
15	GO:0004096: catalase activity	3.05E-04
16	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.05E-04
17	GO:0004373: glycogen (starch) synthase activity	3.05E-04
18	GO:0004148: dihydrolipoyl dehydrogenase activity	3.05E-04
19	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	4.41E-04
20	GO:0016851: magnesium chelatase activity	4.41E-04
21	GO:0016853: isomerase activity	4.76E-04
22	GO:0009011: starch synthase activity	5.87E-04
23	GO:0001053: plastid sigma factor activity	5.87E-04
24	GO:0008453: alanine-glyoxylate transaminase activity	5.87E-04
25	GO:0016987: sigma factor activity	5.87E-04
26	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	7.44E-04
27	GO:0016887: ATPase activity	7.46E-04
28	GO:0016615: malate dehydrogenase activity	9.07E-04
29	GO:0008519: ammonium transmembrane transporter activity	9.07E-04
30	GO:0004332: fructose-bisphosphate aldolase activity	9.07E-04
31	GO:0030060: L-malate dehydrogenase activity	1.08E-03
32	GO:0050897: cobalt ion binding	1.15E-03
33	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.87E-03
34	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.56E-03
35	GO:0019904: protein domain specific binding	2.56E-03
36	GO:0005315: inorganic phosphate transmembrane transporter activity	3.06E-03
37	GO:0003954: NADH dehydrogenase activity	4.15E-03
38	GO:0015079: potassium ion transmembrane transporter activity	4.43E-03
39	GO:0022891: substrate-specific transmembrane transporter activity	5.34E-03
40	GO:0003727: single-stranded RNA binding	5.66E-03
41	GO:0008514: organic anion transmembrane transporter activity	5.66E-03
42	GO:0016791: phosphatase activity	8.79E-03
43	GO:0004721: phosphoprotein phosphatase activity	1.12E-02
44	GO:0030145: manganese ion binding	1.33E-02
45	GO:0004185: serine-type carboxypeptidase activity	1.70E-02
46	GO:0016491: oxidoreductase activity	1.74E-02
47	GO:0051537: 2 iron, 2 sulfur cluster binding	1.79E-02
48	GO:0043621: protein self-association	1.79E-02
49	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.10E-02
50	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.42E-02
51	GO:0016874: ligase activity	2.58E-02
52	GO:0016746: transferase activity, transferring acyl groups	2.75E-02
53	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.22E-02
54	GO:0030170: pyridoxal phosphate binding	3.41E-02
55	GO:0008565: protein transporter activity	3.59E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.64E-15
2	GO:0009535: chloroplast thylakoid membrane	1.21E-08
3	GO:0010287: plastoglobule	3.60E-08
4	GO:0009941: chloroplast envelope	4.97E-07
5	GO:0009579: thylakoid	1.91E-06
6	GO:0009517: PSII associated light-harvesting complex II	5.57E-06
7	GO:0009570: chloroplast stroma	1.69E-05
8	GO:0009523: photosystem II	2.14E-05
9	GO:0009706: chloroplast inner membrane	2.21E-05
10	GO:0009534: chloroplast thylakoid	2.50E-05
11	GO:0030076: light-harvesting complex	1.75E-04
12	GO:0031304: intrinsic component of mitochondrial inner membrane	1.81E-04
13	GO:0009569: chloroplast starch grain	1.81E-04
14	GO:0005777: peroxisome	1.91E-04
15	GO:0042651: thylakoid membrane	2.44E-04
16	GO:0010007: magnesium chelatase complex	3.05E-04
17	GO:0009522: photosystem I	4.76E-04
18	GO:0030286: dynein complex	5.87E-04
19	GO:0010319: stromule	6.95E-04
20	GO:0031982: vesicle	1.46E-03
21	GO:0009514: glyoxysome	1.66E-03
22	GO:0009532: plastid stroma	4.73E-03
23	GO:0031969: chloroplast membrane	1.00E-02
24	GO:0031977: thylakoid lumen	1.60E-02
25	GO:0048046: apoplast	1.86E-02
26	GO:0005747: mitochondrial respiratory chain complex I	2.42E-02
27	GO:0022626: cytosolic ribosome	2.52E-02
28	GO:0005759: mitochondrial matrix	3.72E-02