gene detail

Gene description

TAIR ID: AT1G73250

Short description: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1

Pathogen responsiveness: -1.35

General responsiveness: -1.66

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

'de novo' GDP-L-fucose biosynthetic process, oxidation-reduction process, L-fucose biosynthetic process, GDP-L-fucose biosynthetic process

GO cellular component

cytoplasm

GO molecular function

isomerase activity, coenzyme binding, GDP-L-fucose synthase activity

Protein domain

Pfam	PF01370, NAD dependent epimerase/dehydratase family

Metabolic pathway

PWY-66: GDP-L-fucose biosynthesis I (from GDP-D-mannose)
COLANSYN-PWY: colanic acid building blocks biosynthesis

KEGG pathway

PATH:ath00051: Fructose and mannose metabolism
PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT1G51600, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.53	5.43E-12