Gene: AT1G71720
     


Gene description


TAIR ID: AT1G71720

Short description: Nucleic acid-binding proteins superfamily

Pathogen responsiveness: -0.02

General responsiveness: 0.96

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G087628  

Wheat: No orthologous gene

GO biological process


plastid organization


GO cellular component


chloroplast


GO molecular function


nucleic acid binding


Protein domain


PfamPF00575, S1 RNA binding domain
SMARTSM00316, S1

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


21 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.511.36E-07
GSE17464Penta, controlPenta, Flg22 2 h-1.552.79E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.644.21E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.663.08E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.382.03E-11
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.701.45E-06
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.572.34E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.845.33E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.516.16E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.821.38E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.671.59E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.646.03E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.223.03E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.828.27E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.892.85E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.798.20E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.053.04E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.651.63E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.856.06E-05
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.601.20E-11
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h-1.514.04E-08






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