GO Enrichment Analysis of Co-expressed Genes with
AT1G71720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0006457: protein folding | 3.62E-06 |
| 7 | GO:0015979: photosynthesis | 1.44E-05 |
| 8 | GO:0071482: cellular response to light stimulus | 1.17E-04 |
| 9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.37E-04 |
| 10 | GO:1904964: positive regulation of phytol biosynthetic process | 1.37E-04 |
| 11 | GO:0042371: vitamin K biosynthetic process | 1.37E-04 |
| 12 | GO:0006427: histidyl-tRNA aminoacylation | 1.37E-04 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 1.81E-04 |
| 14 | GO:0045036: protein targeting to chloroplast | 2.04E-04 |
| 15 | GO:0043085: positive regulation of catalytic activity | 2.39E-04 |
| 16 | GO:0006352: DNA-templated transcription, initiation | 2.39E-04 |
| 17 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.16E-04 |
| 18 | GO:0006568: tryptophan metabolic process | 3.16E-04 |
| 19 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.16E-04 |
| 20 | GO:0010020: chloroplast fission | 3.55E-04 |
| 21 | GO:0010581: regulation of starch biosynthetic process | 5.20E-04 |
| 22 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.20E-04 |
| 23 | GO:0006433: prolyl-tRNA aminoacylation | 5.20E-04 |
| 24 | GO:0009658: chloroplast organization | 5.26E-04 |
| 25 | GO:0006418: tRNA aminoacylation for protein translation | 5.43E-04 |
| 26 | GO:0006165: nucleoside diphosphate phosphorylation | 7.44E-04 |
| 27 | GO:0006228: UTP biosynthetic process | 7.44E-04 |
| 28 | GO:0010088: phloem development | 7.44E-04 |
| 29 | GO:0016556: mRNA modification | 7.44E-04 |
| 30 | GO:0006424: glutamyl-tRNA aminoacylation | 7.44E-04 |
| 31 | GO:0006986: response to unfolded protein | 7.44E-04 |
| 32 | GO:2001141: regulation of RNA biosynthetic process | 7.44E-04 |
| 33 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.44E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 7.44E-04 |
| 35 | GO:0071483: cellular response to blue light | 9.85E-04 |
| 36 | GO:0006808: regulation of nitrogen utilization | 9.85E-04 |
| 37 | GO:0010109: regulation of photosynthesis | 9.85E-04 |
| 38 | GO:0006183: GTP biosynthetic process | 9.85E-04 |
| 39 | GO:0032543: mitochondrial translation | 1.25E-03 |
| 40 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.25E-03 |
| 41 | GO:0006828: manganese ion transport | 1.53E-03 |
| 42 | GO:0032973: amino acid export | 1.53E-03 |
| 43 | GO:0006796: phosphate-containing compound metabolic process | 1.53E-03 |
| 44 | GO:0010190: cytochrome b6f complex assembly | 1.53E-03 |
| 45 | GO:0006014: D-ribose metabolic process | 1.53E-03 |
| 46 | GO:0006555: methionine metabolic process | 1.53E-03 |
| 47 | GO:0016554: cytidine to uridine editing | 1.53E-03 |
| 48 | GO:0042026: protein refolding | 1.83E-03 |
| 49 | GO:0006458: 'de novo' protein folding | 1.83E-03 |
| 50 | GO:0009854: oxidative photosynthetic carbon pathway | 1.83E-03 |
| 51 | GO:0043090: amino acid import | 2.15E-03 |
| 52 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.15E-03 |
| 53 | GO:0048481: plant ovule development | 2.18E-03 |
| 54 | GO:0009819: drought recovery | 2.49E-03 |
| 55 | GO:0019430: removal of superoxide radicals | 2.85E-03 |
| 56 | GO:0032544: plastid translation | 2.85E-03 |
| 57 | GO:0080144: amino acid homeostasis | 3.22E-03 |
| 58 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.60E-03 |
| 59 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.60E-03 |
| 60 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.60E-03 |
| 61 | GO:0035999: tetrahydrofolate interconversion | 3.60E-03 |
| 62 | GO:1900865: chloroplast RNA modification | 3.60E-03 |
| 63 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.00E-03 |
| 64 | GO:0006415: translational termination | 4.42E-03 |
| 65 | GO:0009073: aromatic amino acid family biosynthetic process | 4.42E-03 |
| 66 | GO:0006816: calcium ion transport | 4.42E-03 |
| 67 | GO:0009773: photosynthetic electron transport in photosystem I | 4.42E-03 |
| 68 | GO:0006412: translation | 4.99E-03 |
| 69 | GO:0045454: cell redox homeostasis | 5.18E-03 |
| 70 | GO:0090351: seedling development | 6.23E-03 |
| 71 | GO:0010025: wax biosynthetic process | 6.71E-03 |
| 72 | GO:0061077: chaperone-mediated protein folding | 8.26E-03 |
| 73 | GO:0006730: one-carbon metabolic process | 8.79E-03 |
| 74 | GO:0009411: response to UV | 9.35E-03 |
| 75 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.35E-03 |
| 76 | GO:0016117: carotenoid biosynthetic process | 1.05E-02 |
| 77 | GO:0042335: cuticle development | 1.11E-02 |
| 78 | GO:0006662: glycerol ether metabolic process | 1.17E-02 |
| 79 | GO:0007018: microtubule-based movement | 1.23E-02 |
| 80 | GO:0009735: response to cytokinin | 1.25E-02 |
| 81 | GO:0019252: starch biosynthetic process | 1.29E-02 |
| 82 | GO:0016032: viral process | 1.42E-02 |
| 83 | GO:0009828: plant-type cell wall loosening | 1.55E-02 |
| 84 | GO:0010027: thylakoid membrane organization | 1.76E-02 |
| 85 | GO:0018298: protein-chromophore linkage | 2.12E-02 |
| 86 | GO:0055114: oxidation-reduction process | 2.16E-02 |
| 87 | GO:0016051: carbohydrate biosynthetic process | 2.51E-02 |
| 88 | GO:0009637: response to blue light | 2.51E-02 |
| 89 | GO:0009853: photorespiration | 2.51E-02 |
| 90 | GO:0034599: cellular response to oxidative stress | 2.60E-02 |
| 91 | GO:0030001: metal ion transport | 2.76E-02 |
| 92 | GO:0006631: fatty acid metabolic process | 2.84E-02 |
| 93 | GO:0042542: response to hydrogen peroxide | 2.93E-02 |
| 94 | GO:0010114: response to red light | 3.01E-02 |
| 95 | GO:0009793: embryo development ending in seed dormancy | 3.18E-02 |
| 96 | GO:0009664: plant-type cell wall organization | 3.54E-02 |
| 97 | GO:0009585: red, far-red light phototransduction | 3.72E-02 |
| 98 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.82E-02 |
| 99 | GO:0048316: seed development | 4.29E-02 |
| 100 | GO:0009553: embryo sac development | 4.68E-02 |
| 101 | GO:0009624: response to nematode | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 6 | GO:0005048: signal sequence binding | 0.00E+00 |
| 7 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 8 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 9 | GO:0019843: rRNA binding | 5.43E-07 |
| 10 | GO:0051082: unfolded protein binding | 6.56E-06 |
| 11 | GO:0001053: plastid sigma factor activity | 1.55E-05 |
| 12 | GO:0016987: sigma factor activity | 1.55E-05 |
| 13 | GO:0051087: chaperone binding | 2.33E-05 |
| 14 | GO:0004821: histidine-tRNA ligase activity | 1.37E-04 |
| 15 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.37E-04 |
| 16 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.37E-04 |
| 17 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.37E-04 |
| 18 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.37E-04 |
| 19 | GO:0042803: protein homodimerization activity | 1.70E-04 |
| 20 | GO:0008047: enzyme activator activity | 2.04E-04 |
| 21 | GO:0016630: protochlorophyllide reductase activity | 3.16E-04 |
| 22 | GO:0000774: adenyl-nucleotide exchange factor activity | 3.16E-04 |
| 23 | GO:0002161: aminoacyl-tRNA editing activity | 5.20E-04 |
| 24 | GO:0030267: glyoxylate reductase (NADP) activity | 5.20E-04 |
| 25 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 5.20E-04 |
| 26 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 5.20E-04 |
| 27 | GO:0004827: proline-tRNA ligase activity | 5.20E-04 |
| 28 | GO:0017150: tRNA dihydrouridine synthase activity | 5.20E-04 |
| 29 | GO:0016149: translation release factor activity, codon specific | 7.44E-04 |
| 30 | GO:0004550: nucleoside diphosphate kinase activity | 7.44E-04 |
| 31 | GO:0004300: enoyl-CoA hydratase activity | 7.44E-04 |
| 32 | GO:0004812: aminoacyl-tRNA ligase activity | 8.29E-04 |
| 33 | GO:0043495: protein anchor | 9.85E-04 |
| 34 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 9.85E-04 |
| 35 | GO:0004045: aminoacyl-tRNA hydrolase activity | 9.85E-04 |
| 36 | GO:1990137: plant seed peroxidase activity | 9.85E-04 |
| 37 | GO:0004791: thioredoxin-disulfide reductase activity | 1.03E-03 |
| 38 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.25E-03 |
| 39 | GO:0003959: NADPH dehydrogenase activity | 1.25E-03 |
| 40 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.33E-03 |
| 41 | GO:0016462: pyrophosphatase activity | 1.53E-03 |
| 42 | GO:0005525: GTP binding | 1.59E-03 |
| 43 | GO:0004747: ribokinase activity | 1.83E-03 |
| 44 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.83E-03 |
| 45 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.83E-03 |
| 46 | GO:0051920: peroxiredoxin activity | 1.83E-03 |
| 47 | GO:0019899: enzyme binding | 2.15E-03 |
| 48 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 2.15E-03 |
| 49 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 2.15E-03 |
| 50 | GO:0004427: inorganic diphosphatase activity | 2.15E-03 |
| 51 | GO:0003735: structural constituent of ribosome | 2.19E-03 |
| 52 | GO:0042802: identical protein binding | 2.45E-03 |
| 53 | GO:0004033: aldo-keto reductase (NADP) activity | 2.49E-03 |
| 54 | GO:0008865: fructokinase activity | 2.49E-03 |
| 55 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 2.49E-03 |
| 56 | GO:0016209: antioxidant activity | 2.49E-03 |
| 57 | GO:0008312: 7S RNA binding | 2.49E-03 |
| 58 | GO:0003747: translation release factor activity | 3.22E-03 |
| 59 | GO:0005384: manganese ion transmembrane transporter activity | 3.60E-03 |
| 60 | GO:0047617: acyl-CoA hydrolase activity | 3.60E-03 |
| 61 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.12E-03 |
| 62 | GO:0044183: protein binding involved in protein folding | 4.42E-03 |
| 63 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.75E-03 |
| 64 | GO:0000049: tRNA binding | 4.85E-03 |
| 65 | GO:0015095: magnesium ion transmembrane transporter activity | 5.30E-03 |
| 66 | GO:0031072: heat shock protein binding | 5.30E-03 |
| 67 | GO:0008266: poly(U) RNA binding | 5.76E-03 |
| 68 | GO:0003924: GTPase activity | 6.75E-03 |
| 69 | GO:0009055: electron carrier activity | 7.39E-03 |
| 70 | GO:0004519: endonuclease activity | 7.51E-03 |
| 71 | GO:0005509: calcium ion binding | 8.04E-03 |
| 72 | GO:0022891: substrate-specific transmembrane transporter activity | 9.35E-03 |
| 73 | GO:0047134: protein-disulfide reductase activity | 1.05E-02 |
| 74 | GO:0005524: ATP binding | 1.15E-02 |
| 75 | GO:0008080: N-acetyltransferase activity | 1.17E-02 |
| 76 | GO:0050662: coenzyme binding | 1.23E-02 |
| 77 | GO:0004518: nuclease activity | 1.42E-02 |
| 78 | GO:0000287: magnesium ion binding | 1.78E-02 |
| 79 | GO:0004601: peroxidase activity | 1.82E-02 |
| 80 | GO:0016168: chlorophyll binding | 1.83E-02 |
| 81 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 2.05E-02 |
| 82 | GO:0008236: serine-type peptidase activity | 2.05E-02 |
| 83 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.12E-02 |
| 84 | GO:0005507: copper ion binding | 2.19E-02 |
| 85 | GO:0003746: translation elongation factor activity | 2.51E-02 |
| 86 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.60E-02 |
| 87 | GO:0004185: serine-type carboxypeptidase activity | 3.01E-02 |
| 88 | GO:0003723: RNA binding | 3.08E-02 |
| 89 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.19E-02 |
| 90 | GO:0043621: protein self-association | 3.19E-02 |
| 91 | GO:0005198: structural molecule activity | 3.27E-02 |
| 92 | GO:0046872: metal ion binding | 3.36E-02 |
| 93 | GO:0015171: amino acid transmembrane transporter activity | 4.00E-02 |
| 94 | GO:0003777: microtubule motor activity | 4.00E-02 |
| 95 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.29E-02 |
| 96 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.49E-02 |
| 97 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.49E-02 |
| 98 | GO:0015035: protein disulfide oxidoreductase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.47E-42 |
| 2 | GO:0009570: chloroplast stroma | 3.49E-29 |
| 3 | GO:0009941: chloroplast envelope | 1.17E-19 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 8.67E-09 |
| 5 | GO:0009579: thylakoid | 1.50E-08 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 5.43E-07 |
| 7 | GO:0031977: thylakoid lumen | 2.55E-05 |
| 8 | GO:0017101: aminoacyl-tRNA synthetase multienzyme complex | 1.37E-04 |
| 9 | GO:0009547: plastid ribosome | 1.37E-04 |
| 10 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.37E-04 |
| 11 | GO:0000311: plastid large ribosomal subunit | 2.75E-04 |
| 12 | GO:0080085: signal recognition particle, chloroplast targeting | 3.16E-04 |
| 13 | GO:0042651: thylakoid membrane | 5.43E-04 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 5.43E-04 |
| 15 | GO:0009532: plastid stroma | 5.96E-04 |
| 16 | GO:0019898: extrinsic component of membrane | 1.10E-03 |
| 17 | GO:0000793: condensed chromosome | 1.53E-03 |
| 18 | GO:0005759: mitochondrial matrix | 1.60E-03 |
| 19 | GO:0005762: mitochondrial large ribosomal subunit | 1.83E-03 |
| 20 | GO:0000794: condensed nuclear chromosome | 2.15E-03 |
| 21 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.85E-03 |
| 22 | GO:0005811: lipid particle | 2.85E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.22E-03 |
| 24 | GO:0009536: plastid | 3.29E-03 |
| 25 | GO:0031969: chloroplast membrane | 4.12E-03 |
| 26 | GO:0009534: chloroplast thylakoid | 4.15E-03 |
| 27 | GO:0000312: plastid small ribosomal subunit | 5.76E-03 |
| 28 | GO:0030095: chloroplast photosystem II | 5.76E-03 |
| 29 | GO:0043231: intracellular membrane-bounded organelle | 7.65E-03 |
| 30 | GO:0005623: cell | 8.69E-03 |
| 31 | GO:0005871: kinesin complex | 1.05E-02 |
| 32 | GO:0009523: photosystem II | 1.29E-02 |
| 33 | GO:0046658: anchored component of plasma membrane | 1.55E-02 |
| 34 | GO:0009295: nucleoid | 1.62E-02 |
| 35 | GO:0010319: stromule | 1.62E-02 |
| 36 | GO:0030529: intracellular ribonucleoprotein complex | 1.76E-02 |
| 37 | GO:0009707: chloroplast outer membrane | 2.12E-02 |
| 38 | GO:0005874: microtubule | 2.18E-02 |
| 39 | GO:0015934: large ribosomal subunit | 2.36E-02 |
| 40 | GO:0005840: ribosome | 3.60E-02 |
| 41 | GO:0016020: membrane | 4.38E-02 |
| 42 | GO:0009706: chloroplast inner membrane | 4.78E-02 |