Gene description
TAIR ID: AT1G65040
Short description: RING/U-box superfamily protein
Pathogen responsiveness: -0.75
General responsiveness: -1.86
Orthologous
GO biological process
protein ubiquitination involved in ubiquitin-dependent protein catabolic process, ubiquitin-dependent ERAD pathway, endoplasmic reticulum unfolded protein response, protein polyubiquitination
GO cellular component
Hrd1p ubiquitin ligase complex, plasma membrane, Derlin-1 retrotranslocation complex, integral component of membrane, endoplasmic reticulum quality control compartment
GO molecular function
ubiquitin protein ligase activity involved in ERAD pathway, ubiquitin-specific protease binding, unfolded protein binding, metal ion binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
PATH:ath04141: Protein processing in endoplasmic reticulum
PATH:ath04120: Ubiquitin mediated proteolysis
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
9 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | 1.61 | 1.15E-08 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 2.45 | 3.18E-05 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 2.24 | 6.82E-05 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 2.32 | 5.85E-05 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 1.62 | 2.09E-11 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 1.56 | 4.86E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 2.34 | 1.30E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.84 | 4.73E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 3.14 | 2.39E-15 |
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