co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G65040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043248: proteasome assembly	4.25E-06
2	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	6.19E-06
3	GO:0030968: endoplasmic reticulum unfolded protein response	1.49E-05
4	GO:0035266: meristem growth	3.64E-05
5	GO:0000077: DNA damage checkpoint	3.64E-05
6	GO:0007292: female gamete generation	3.64E-05
7	GO:0042350: GDP-L-fucose biosynthetic process	3.64E-05
8	GO:0071076: RNA 3' uridylation	3.64E-05
9	GO:1990022: RNA polymerase III complex localization to nucleus	3.64E-05
10	GO:0044376: RNA polymerase II complex import to nucleus	3.64E-05
11	GO:0009156: ribonucleoside monophosphate biosynthetic process	9.09E-05
12	GO:0006597: spermine biosynthetic process	9.09E-05
13	GO:0034470: ncRNA processing	9.09E-05
14	GO:0042853: L-alanine catabolic process	9.09E-05
15	GO:0040020: regulation of meiotic nuclear division	9.09E-05
16	GO:0051788: response to misfolded protein	9.09E-05
17	GO:0009790: embryo development	1.51E-04
18	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.58E-04
19	GO:0060968: regulation of gene silencing	1.58E-04
20	GO:0060964: regulation of gene silencing by miRNA	2.33E-04
21	GO:0072334: UDP-galactose transmembrane transport	2.33E-04
22	GO:0010971: positive regulation of G2/M transition of mitotic cell cycle	2.33E-04
23	GO:0009226: nucleotide-sugar biosynthetic process	2.33E-04
24	GO:0006457: protein folding	3.09E-04
25	GO:0009165: nucleotide biosynthetic process	3.14E-04
26	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.92E-04
27	GO:0048827: phyllome development	4.92E-04
28	GO:0048232: male gamete generation	4.92E-04
29	GO:0006596: polyamine biosynthetic process	4.92E-04
30	GO:0006744: ubiquinone biosynthetic process	6.87E-04
31	GO:0000338: protein deneddylation	6.87E-04
32	GO:0010078: maintenance of root meristem identity	7.90E-04
33	GO:0007155: cell adhesion	7.90E-04
34	GO:0010100: negative regulation of photomorphogenesis	8.97E-04
35	GO:0015780: nucleotide-sugar transport	1.01E-03
36	GO:0010332: response to gamma radiation	1.01E-03
37	GO:0009553: embryo sac development	1.17E-03
38	GO:0046686: response to cadmium ion	1.20E-03
39	GO:0048829: root cap development	1.24E-03
40	GO:0010015: root morphogenesis	1.36E-03
41	GO:0000266: mitochondrial fission	1.49E-03
42	GO:0009058: biosynthetic process	1.57E-03
43	GO:0007275: multicellular organism development	1.70E-03
44	GO:0009933: meristem structural organization	1.76E-03
45	GO:0090351: seedling development	1.89E-03
46	GO:0007033: vacuole organization	1.89E-03
47	GO:0009116: nucleoside metabolic process	2.18E-03
48	GO:0006511: ubiquitin-dependent protein catabolic process	2.19E-03
49	GO:0008299: isoprenoid biosynthetic process	2.33E-03
50	GO:0030433: ubiquitin-dependent ERAD pathway	2.64E-03
51	GO:0009306: protein secretion	2.96E-03
52	GO:0010118: stomatal movement	3.30E-03
53	GO:0006623: protein targeting to vacuole	3.82E-03
54	GO:0000302: response to reactive oxygen species	4.00E-03
55	GO:0016192: vesicle-mediated transport	4.07E-03
56	GO:0030163: protein catabolic process	4.37E-03
57	GO:0001666: response to hypoxia	5.15E-03
58	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	5.35E-03
59	GO:0006906: vesicle fusion	5.55E-03
60	GO:0009408: response to heat	5.69E-03
61	GO:0010311: lateral root formation	6.39E-03
62	GO:0006499: N-terminal protein myristoylation	6.61E-03
63	GO:0045087: innate immune response	7.28E-03
64	GO:0034599: cellular response to oxidative stress	7.51E-03
65	GO:0006887: exocytosis	8.21E-03
66	GO:0010114: response to red light	8.68E-03
67	GO:0009640: photomorphogenesis	8.68E-03
68	GO:0009965: leaf morphogenesis	9.42E-03
69	GO:0009555: pollen development	1.01E-02
70	GO:0006486: protein glycosylation	1.07E-02
71	GO:0009585: red, far-red light phototransduction	1.07E-02
72	GO:0010224: response to UV-B	1.10E-02
73	GO:0051301: cell division	1.10E-02
74	GO:0048367: shoot system development	1.23E-02
75	GO:0042744: hydrogen peroxide catabolic process	1.76E-02
76	GO:0006413: translational initiation	1.92E-02
77	GO:0010150: leaf senescence	2.02E-02
78	GO:0042742: defense response to bacterium	2.05E-02
79	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.19E-02
80	GO:0006470: protein dephosphorylation	2.23E-02
81	GO:0009658: chloroplast organization	2.76E-02
82	GO:0042254: ribosome biogenesis	2.80E-02
83	GO:0009860: pollen tube growth	2.91E-02
84	GO:0007049: cell cycle	2.99E-02
85	GO:0016042: lipid catabolic process	4.16E-02
86	GO:0007165: signal transduction	4.26E-02
87	GO:0048364: root development	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0061133: endopeptidase activator activity	0.00E+00
2	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
3	GO:0005460: UDP-glucose transmembrane transporter activity	8.23E-07
4	GO:0005459: UDP-galactose transmembrane transporter activity	2.73E-06
5	GO:0016768: spermine synthase activity	3.64E-05
6	GO:0050265: RNA uridylyltransferase activity	3.64E-05
7	GO:0050577: GDP-L-fucose synthase activity	3.64E-05
8	GO:0019784: NEDD8-specific protease activity	3.64E-05
9	GO:0004766: spermidine synthase activity	9.09E-05
10	GO:0050347: trans-octaprenyltranstransferase activity	9.09E-05
11	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	9.09E-05
12	GO:0000030: mannosyltransferase activity	1.58E-04
13	GO:0004749: ribose phosphate diphosphokinase activity	2.33E-04
14	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.33E-04
15	GO:0004659: prenyltransferase activity	3.14E-04
16	GO:0070628: proteasome binding	3.14E-04
17	GO:0016688: L-ascorbate peroxidase activity	4.92E-04
18	GO:0036402: proteasome-activating ATPase activity	4.92E-04
19	GO:0004130: cytochrome-c peroxidase activity	4.92E-04
20	GO:0003924: GTPase activity	7.36E-04
21	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.01E-03
22	GO:0051082: unfolded protein binding	1.20E-03
23	GO:0004161: dimethylallyltranstransferase activity	1.36E-03
24	GO:0005388: calcium-transporting ATPase activity	1.62E-03
25	GO:0017025: TBP-class protein binding	1.89E-03
26	GO:0043130: ubiquitin binding	2.18E-03
27	GO:0016779: nucleotidyltransferase activity	2.64E-03
28	GO:0016853: isomerase activity	3.64E-03
29	GO:0050662: coenzyme binding	3.64E-03
30	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.18E-03
31	GO:0050897: cobalt ion binding	6.83E-03
32	GO:0003746: translation elongation factor activity	7.28E-03
33	GO:0000149: SNARE binding	7.74E-03
34	GO:0005484: SNAP receptor activity	8.68E-03
35	GO:0005198: structural molecule activity	9.42E-03
36	GO:0045735: nutrient reservoir activity	1.20E-02
37	GO:0005524: ATP binding	1.53E-02
38	GO:0005525: GTP binding	1.67E-02
39	GO:0030170: pyridoxal phosphate binding	1.73E-02
40	GO:0008017: microtubule binding	2.09E-02
41	GO:0003743: translation initiation factor activity	2.26E-02
42	GO:0000287: magnesium ion binding	2.72E-02
43	GO:0004601: peroxidase activity	2.76E-02
44	GO:0004722: protein serine/threonine phosphatase activity	3.91E-02

Rank	GO Term	Adjusted P value
1	GO:0033106: cis-Golgi network membrane	0.00E+00
2	GO:0008541: proteasome regulatory particle, lid subcomplex	3.37E-05
3	GO:0030176: integral component of endoplasmic reticulum membrane	6.14E-05
4	GO:0005788: endoplasmic reticulum lumen	3.27E-04
5	GO:0031597: cytosolic proteasome complex	5.88E-04
6	GO:0030173: integral component of Golgi membrane	5.88E-04
7	GO:0031595: nuclear proteasome complex	6.87E-04
8	GO:0000502: proteasome complex	8.60E-04
9	GO:0031901: early endosome membrane	1.01E-03
10	GO:0008180: COP9 signalosome	1.01E-03
11	GO:0008540: proteasome regulatory particle, base subcomplex	1.12E-03
12	GO:0043234: protein complex	2.04E-03
13	GO:0005783: endoplasmic reticulum	2.99E-03
14	GO:0005874: microtubule	3.74E-03
15	GO:0016592: mediator complex	4.19E-03
16	GO:0000932: P-body	5.15E-03
17	GO:0030529: intracellular ribonucleoprotein complex	5.15E-03
18	GO:0031201: SNARE complex	8.21E-03
19	GO:0005834: heterotrimeric G-protein complex	1.26E-02
20	GO:0016020: membrane	1.48E-02
21	GO:0005654: nucleoplasm	1.58E-02
22	GO:0009524: phragmoplast	1.67E-02
23	GO:0005774: vacuolar membrane	1.75E-02
24	GO:0009507: chloroplast	2.15E-02
25	GO:0005737: cytoplasm	2.54E-02
26	GO:0005886: plasma membrane	2.59E-02
27	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.95E-02
28	GO:0009506: plasmodesma	3.01E-02
29	GO:0005789: endoplasmic reticulum membrane	3.14E-02
30	GO:0043231: intracellular membrane-bounded organelle	4.55E-02
31	GO:0005829: cytosol	4.57E-02