gene detail

Gene description

TAIR ID: AT1G63780

Short description: Ribosomal RNA processing Brix domain protein

Pathogen responsiveness: -1.99

General responsiveness: -1.08

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

rRNA processing

GO cellular component

small-subunit processome, nucleolus, viral nucleocapsid, Cajal body, nuclear matrix, Mpp10 complex, nucleus

GO molecular function

snoRNA binding, rRNA primary transcript binding

Protein domain

Pfam	PF04427, Brix domain
SMART	SM00879, Brix

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03008: Ribosome biogenesis in eukaryotes

Transcriptional regulation

Regulator:
AT2G38250

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.61	1.19E-11
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.60	4.19E-03