Gene: AT1G60590
Gene description
TAIR ID: AT1G60590
Short description: Pectin lyase-like superfamily protein
Pathogen responsiveness: 1.25
General responsiveness: 2.29
GO biological process
cell wall organization, carbohydrate metabolic process
GO cellular component
extracellular region
GO molecular function
lyase activity, polygalacturonase activity
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
35 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE11807 | Col, ERF104 ox, water 4 h | Col, ERF104 ox, Flg22 4 h | -1.81 | 4.30E-02 |
| GSE11807 | Col, erf104 ko, water 4 h | Col, erf104 ko, Flg22 4 h | -2.08 | 1.99E-02 |
| GSE12856 | Col, WT, control | Col, WT, Bg h | -3.26 | 2.54E-08 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | -3.91 | 3.72E-09 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 1 h | -1.93 | 1.99E-02 |
| GSE17464 | Laer, JA+Flg22 0 h | Laer, JA+Flg22 2 h | -2.04 | 9.79E-03 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | -1.66 | 2.58E-02 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | -2.20 | 2.43E-03 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -3.80 | 1.36E-06 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -3.87 | 4.18E-07 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -3.88 | 9.03E-07 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -4.62 | 1.08E-11 |
| GSE26206 | Col, WT, control | Col, WT, R.solani_AG8 7 d | -1.97 | 3.65E-05 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | -1.89 | 2.13E-11 |
| GSE37269 | Ler0, WT, control | Ler0, WT, TEV 21 d | -2.01 | 1.35E-02 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -2.87 | 1.01E-04 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | -5.44 | 4.11E-07 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | -5.30 | 3.68E-07 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | -5.51 | 3.03E-07 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 EV | -4.32 | 1.27E-05 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.23 | 3.63E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | -1.50 | 3.43E-09 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -2.17 | 7.98E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.61 | 4.48E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.67 | 2.40E-10 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -3.27 | 1.21E-10 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | -3.35 | 1.04E-03 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | -3.04 | 9.43E-06 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | -2.88 | 1.47E-05 |
| GSE5615 | Col, WT, water 4 h | Col, WT, Flg22 4 h | -1.62 | 2.55E-03 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | -2.06 | 1.14E-04 |
| GSE5616 | Col, WT, water 12 h | Col, WT, P. infestans 12 h | -1.84 | 1.42E-05 |
| GSE5616 | Col, WT, water 24 h | Col, WT, P. infestans 24 h | -3.07 | 2.05E-07 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | -2.96 | 1.19E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 90-105 min | 2.37 | 9.99E-03 |
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