Gene: AT1G60190
     

Gene description


TAIR ID: AT1G60190

Short description: ARM repeat superfamily protein

Pathogen responsiveness: 0.24

General responsiveness: 1.59

GO biological process


protein ubiquitination, regulation of seed germination


GO cellular component


cytoplasm, nucleus


GO molecular function


ubiquitin-protein transferase activity


Protein domain


PfamPF04564, U-box domain
PfamPF00514, Armadillo/beta-catenin-like repeat
SMARTSM00504, Ubox
SMARTSM00185, ARM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260, AT2G20180, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


26 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.259.90E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-2.116.35E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-1.951.49E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.981.22E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-2.622.01E-06
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.831.52E-02
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d-2.572.40E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.249.04E-06
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-2.121.26E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.932.61E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.541.68E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.662.57E-08
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.342.24E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.681.10E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h-2.713.95E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-3.008.94E-04
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h-2.161.63E-02
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-3.945.57E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.725.89E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.721.40E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.246.02E-04
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h1.759.47E-03
GSE56094Col, WT, control 3 hCol, WT, PstDC3000 3 h-2.111.17E-02
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.553.49E-02
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.121.70E-03
GSE5686Col, WT, control 4 dCol, WT, G.orontii 4 d-1.503.10E-02






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