gene detail

Gene description

TAIR ID: AT1G56600

Short description: galactinol synthase 2

Pathogen responsiveness: -0.25

General responsiveness: 1.20

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TAAFFX.17365.2.A1_AT

GO biological process

response to abscisic acid, carbohydrate biosynthetic process, response to cold, galactose metabolic process, response to water deprivation, response to salt stress, response to oxidative stress

GO cellular component

nucleus, cytoplasm

GO molecular function

transferase activity, transferring glycosyl groups, inositol 3-alpha-galactosyltransferase activity, transferring hexosyl groups, metal ion binding

Protein domain

Pfam	PF01501, Glycosyl transferase family 8

Metabolic pathway

PWY-5337: stachyose biosynthesis

KEGG pathway

PATH:ath00052: Galactose metabolism

Transcriptional regulation

Regulator:
AT5G13790, AT5G16820, AT4G17750, AT1G24260, AT2G20180, AT2G26150

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

14 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.77	4.40E-04
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.73	6.67E-04
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.66	9.32E-04
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	3.35	9.53E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	3.11	4.21E-08
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.98	2.11E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.53	1.24E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.06	5.98E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.62	9.83E-04
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.71	1.08E-04
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.20	3.62E-06
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.80	7.41E-05
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.39	1.98E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.67	1.04E-02