gene detail

Gene description

TAIR ID: AT1G55960

Short description: Polyketide cyclase/dehydrase and lipid transport superfamily protein

Pathogen responsiveness: 0.34

General responsiveness: 1.16

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

integral component of membrane

GO molecular function

lipid binding

Protein domain

Pfam	PF01852, START domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.94	2.52E-02
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.85	3.14E-02
GSE17464	Laer, control	Laer, Flg22 2 h	-2.33	3.52E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-2.60	1.51E-03
GSE17464	Penta, control	Penta, PstDC3000 12 h	-3.28	5.73E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-2.51	1.98E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-3.55	2.25E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.58	1.78E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.25	4.47E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-3.28	3.29E-17
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-3.73	5.09E-19
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-3.26	3.09E-17
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-3.49	2.19E-18
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.68	8.38E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.54	1.22E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.73	3.30E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.53	1.28E-11
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.95	8.22E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.14	8.00E-13
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.20	4.83E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.27	3.09E-04
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.67	1.39E-15
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.75	1.24E-03
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.57	1.72E-05