Gene: AT1G54320
     

Gene description


TAIR ID: AT1G54320

Short description: LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein

Pathogen responsiveness: -1.50

General responsiveness: -1.97

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G090849  

Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


endoplasmic reticulum membrane, late endosome membrane, membrane, Golgi membrane, integral component of membrane, Golgi apparatus


GO molecular function


protein binding


Protein domain


PfamPF03381, LEM3 (ligand-effect modulator 3) family / CDC50 family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 30 (Top5%)

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.992.60E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.742.40E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.731.56E-13






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