gene detail

Gene description

TAIR ID: AT1G51710

Short description: ubiquitin-specific protease 6

Pathogen responsiveness: -2.29

General responsiveness: -1.90

Orthologous

Rice:

Maize:

Wheat:

GO biological process

ubiquitin-dependent protein catabolic process, protein deubiquitination

GO cellular component

nucleus, plasmodesma

GO molecular function

thiol-dependent ubiquitinyl hydrolase activity, thiol-dependent ubiquitin-specific protease activity

Protein domain

Pfam	PF00240, Ubiquitin family
Pfam	PF00443, Ubiquitin carboxyl-terminal hydrolase
SMART	SM00213, UBQ

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.66	3.62E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.89	1.81E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.85	2.00E-15