co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G51710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
2	GO:0006511: ubiquitin-dependent protein catabolic process	3.80E-09
3	GO:0006099: tricarboxylic acid cycle	4.23E-08
4	GO:0046686: response to cadmium ion	1.49E-07
5	GO:0006102: isocitrate metabolic process	1.80E-07
6	GO:0010363: regulation of plant-type hypersensitive response	4.21E-06
7	GO:0006096: glycolytic process	9.67E-06
8	GO:0030163: protein catabolic process	2.08E-05
9	GO:0006098: pentose-phosphate shunt	4.54E-05
10	GO:0033306: phytol metabolic process	6.42E-05
11	GO:0051775: response to redox state	6.42E-05
12	GO:0080120: CAAX-box protein maturation	6.42E-05
13	GO:0071586: CAAX-box protein processing	6.42E-05
14	GO:0051245: negative regulation of cellular defense response	6.42E-05
15	GO:0006422: aspartyl-tRNA aminoacylation	6.42E-05
16	GO:0080173: male-female gamete recognition during double fertilization	6.42E-05
17	GO:0050792: regulation of viral process	6.42E-05
18	GO:0006006: glucose metabolic process	1.07E-04
19	GO:0006094: gluconeogenesis	1.07E-04
20	GO:0031349: positive regulation of defense response	1.55E-04
21	GO:0009156: ribonucleoside monophosphate biosynthetic process	1.55E-04
22	GO:0015824: proline transport	1.55E-04
23	GO:0019521: D-gluconate metabolic process	1.55E-04
24	GO:0009651: response to salt stress	1.76E-04
25	GO:0072661: protein targeting to plasma membrane	2.63E-04
26	GO:0010148: transpiration	3.82E-04
27	GO:0006612: protein targeting to membrane	3.82E-04
28	GO:0001676: long-chain fatty acid metabolic process	3.82E-04
29	GO:0055114: oxidation-reduction process	4.25E-04
30	GO:0009165: nucleotide biosynthetic process	5.10E-04
31	GO:0006564: L-serine biosynthetic process	6.45E-04
32	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	7.90E-04
33	GO:0010043: response to zinc ion	9.34E-04
34	GO:0009094: L-phenylalanine biosynthetic process	9.40E-04
35	GO:0006631: fatty acid metabolic process	1.20E-03
36	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.26E-03
37	GO:0048658: anther wall tapetum development	1.26E-03
38	GO:0019432: triglyceride biosynthetic process	1.62E-03
39	GO:0080144: amino acid homeostasis	1.62E-03
40	GO:0046685: response to arsenic-containing substance	1.62E-03
41	GO:0009051: pentose-phosphate shunt, oxidative branch	1.62E-03
42	GO:0051603: proteolysis involved in cellular protein catabolic process	1.79E-03
43	GO:0030042: actin filament depolymerization	1.81E-03
44	GO:0043069: negative regulation of programmed cell death	2.01E-03
45	GO:0009807: lignan biosynthetic process	2.21E-03
46	GO:0009073: aromatic amino acid family biosynthetic process	2.21E-03
47	GO:0018119: peptidyl-cysteine S-nitrosylation	2.21E-03
48	GO:0006807: nitrogen compound metabolic process	2.64E-03
49	GO:0048440: carpel development	2.87E-03
50	GO:0046688: response to copper ion	3.09E-03
51	GO:0070588: calcium ion transmembrane transport	3.09E-03
52	GO:0009863: salicylic acid mediated signaling pathway	3.57E-03
53	GO:0009116: nucleoside metabolic process	3.57E-03
54	GO:0006825: copper ion transport	3.82E-03
55	GO:0048278: vesicle docking	4.08E-03
56	GO:0030433: ubiquitin-dependent ERAD pathway	4.34E-03
57	GO:0031348: negative regulation of defense response	4.34E-03
58	GO:0019722: calcium-mediated signaling	4.87E-03
59	GO:0009561: megagametogenesis	4.87E-03
60	GO:0051028: mRNA transport	5.15E-03
61	GO:0080022: primary root development	5.43E-03
62	GO:0010154: fruit development	5.72E-03
63	GO:0009737: response to abscisic acid	5.95E-03
64	GO:0061025: membrane fusion	6.01E-03
65	GO:0010193: response to ozone	6.61E-03
66	GO:0007264: small GTPase mediated signal transduction	6.92E-03
67	GO:0009615: response to virus	8.54E-03
68	GO:0006906: vesicle fusion	9.22E-03
69	GO:0006979: response to oxidative stress	9.36E-03
70	GO:0006508: proteolysis	1.04E-02
71	GO:0048767: root hair elongation	1.07E-02
72	GO:0010119: regulation of stomatal movement	1.14E-02
73	GO:0006865: amino acid transport	1.18E-02
74	GO:0009408: response to heat	1.19E-02
75	GO:0009867: jasmonic acid mediated signaling pathway	1.22E-02
76	GO:0009853: photorespiration	1.22E-02
77	GO:0015031: protein transport	1.26E-02
78	GO:0008152: metabolic process	1.31E-02
79	GO:0006887: exocytosis	1.37E-02
80	GO:0042542: response to hydrogen peroxide	1.41E-02
81	GO:0009744: response to sucrose	1.45E-02
82	GO:0009644: response to high light intensity	1.54E-02
83	GO:0009909: regulation of flower development	1.93E-02
84	GO:0048316: seed development	2.07E-02
85	GO:0009555: pollen development	2.11E-02
86	GO:0009620: response to fungus	2.16E-02
87	GO:0018105: peptidyl-serine phosphorylation	2.36E-02
88	GO:0006952: defense response	2.51E-02
89	GO:0009058: biosynthetic process	2.81E-02
90	GO:0050832: defense response to fungus	3.65E-02
91	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.69E-02
92	GO:0009617: response to bacterium	3.86E-02
93	GO:0006468: protein phosphorylation	4.07E-02

Rank	GO Term	Adjusted P value
1	GO:0004298: threonine-type endopeptidase activity	2.33E-12
2	GO:0051287: NAD binding	2.31E-09
3	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.37E-07
4	GO:0008233: peptidase activity	4.33E-07
5	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	2.19E-06
6	GO:0000287: magnesium ion binding	5.61E-06
7	GO:0005507: copper ion binding	2.14E-05
8	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	6.42E-05
9	GO:0004815: aspartate-tRNA ligase activity	6.42E-05
10	GO:0050661: NADP binding	8.21E-05
11	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.55E-04
12	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	1.55E-04
13	GO:0015036: disulfide oxidoreductase activity	1.55E-04
14	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.55E-04
15	GO:0004634: phosphopyruvate hydratase activity	1.55E-04
16	GO:0004617: phosphoglycerate dehydrogenase activity	1.55E-04
17	GO:0015193: L-proline transmembrane transporter activity	2.63E-04
18	GO:0005093: Rab GDP-dissociation inhibitor activity	2.63E-04
19	GO:0016531: copper chaperone activity	2.63E-04
20	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.82E-04
21	GO:0004108: citrate (Si)-synthase activity	3.82E-04
22	GO:0004749: ribose phosphate diphosphokinase activity	3.82E-04
23	GO:0043495: protein anchor	5.10E-04
24	GO:0003995: acyl-CoA dehydrogenase activity	5.10E-04
25	GO:0047769: arogenate dehydratase activity	5.10E-04
26	GO:0004345: glucose-6-phosphate dehydrogenase activity	5.10E-04
27	GO:0004664: prephenate dehydratase activity	5.10E-04
28	GO:0016597: amino acid binding	5.98E-04
29	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	7.90E-04
30	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	7.90E-04
31	GO:0036402: proteasome-activating ATPase activity	7.90E-04
32	GO:0004332: fructose-bisphosphate aldolase activity	7.90E-04
33	GO:0102391: decanoate--CoA ligase activity	9.40E-04
34	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	9.40E-04
35	GO:0004144: diacylglycerol O-acyltransferase activity	9.40E-04
36	GO:0004467: long-chain fatty acid-CoA ligase activity	1.10E-03
37	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.10E-03
38	GO:0005524: ATP binding	1.42E-03
39	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.44E-03
40	GO:0071949: FAD binding	1.62E-03
41	GO:0004129: cytochrome-c oxidase activity	2.21E-03
42	GO:0005262: calcium channel activity	2.64E-03
43	GO:0005388: calcium-transporting ATPase activity	2.64E-03
44	GO:0004175: endopeptidase activity	2.87E-03
45	GO:0017025: TBP-class protein binding	3.09E-03
46	GO:0004540: ribonuclease activity	4.08E-03
47	GO:0008194: UDP-glycosyltransferase activity	4.69E-03
48	GO:0008237: metallopeptidase activity	7.88E-03
49	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.22E-03
50	GO:0004683: calmodulin-dependent protein kinase activity	9.57E-03
51	GO:0005096: GTPase activator activity	1.07E-02
52	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.10E-02
53	GO:0004222: metalloendopeptidase activity	1.10E-02
54	GO:0000149: SNARE binding	1.29E-02
55	GO:0016491: oxidoreductase activity	1.32E-02
56	GO:0005484: SNAP receptor activity	1.45E-02
57	GO:0004672: protein kinase activity	1.51E-02
58	GO:0051537: 2 iron, 2 sulfur cluster binding	1.54E-02
59	GO:0005515: protein binding	1.81E-02
60	GO:0015171: amino acid transmembrane transporter activity	1.93E-02
61	GO:0008234: cysteine-type peptidase activity	1.93E-02
62	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.16E-02
63	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.16E-02
64	GO:0022857: transmembrane transporter activity	2.21E-02
65	GO:0003779: actin binding	2.26E-02
66	GO:0016758: transferase activity, transferring hexosyl groups	2.66E-02
67	GO:0030170: pyridoxal phosphate binding	2.92E-02
68	GO:0004252: serine-type endopeptidase activity	2.92E-02
69	GO:0005516: calmodulin binding	3.18E-02
70	GO:0005509: calcium ion binding	3.94E-02
71	GO:0016757: transferase activity, transferring glycosyl groups	4.31E-02
72	GO:0016301: kinase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000502: proteasome complex	8.00E-15
3	GO:0005839: proteasome core complex	2.33E-12
4	GO:0019773: proteasome core complex, alpha-subunit complex	1.05E-09
5	GO:0005829: cytosol	1.43E-09
6	GO:0005740: mitochondrial envelope	6.67E-05
7	GO:0009507: chloroplast	7.13E-05
8	GO:0008541: proteasome regulatory particle, lid subcomplex	7.90E-05
9	GO:0005777: peroxisome	1.22E-04
10	GO:0000015: phosphopyruvate hydratase complex	1.55E-04
11	GO:0031314: extrinsic component of mitochondrial inner membrane	1.55E-04
12	GO:0005901: caveola	1.55E-04
13	GO:0005774: vacuolar membrane	1.91E-04
14	GO:0030658: transport vesicle membrane	3.82E-04
15	GO:0005886: plasma membrane	4.02E-04
16	GO:0009536: plastid	5.34E-04
17	GO:0005746: mitochondrial respiratory chain	6.45E-04
18	GO:0009570: chloroplast stroma	8.35E-04
19	GO:0009840: chloroplastic endopeptidase Clp complex	9.40E-04
20	GO:0031597: cytosolic proteasome complex	9.40E-04
21	GO:0031595: nuclear proteasome complex	1.10E-03
22	GO:0016604: nuclear body	1.81E-03
23	GO:0008540: proteasome regulatory particle, base subcomplex	1.81E-03
24	GO:0005737: cytoplasm	2.67E-03
25	GO:0005750: mitochondrial respiratory chain complex III	2.87E-03
26	GO:0010287: plastoglobule	2.90E-03
27	GO:0030176: integral component of endoplasmic reticulum membrane	3.09E-03
28	GO:0005758: mitochondrial intermembrane space	3.57E-03
29	GO:0022626: cytosolic ribosome	3.58E-03
30	GO:0045271: respiratory chain complex I	3.82E-03
31	GO:0009506: plasmodesma	3.85E-03
32	GO:0009532: plastid stroma	4.08E-03
33	GO:0005741: mitochondrial outer membrane	4.08E-03
34	GO:0015629: actin cytoskeleton	4.60E-03
35	GO:0009534: chloroplast thylakoid	4.81E-03
36	GO:0016020: membrane	5.56E-03
37	GO:0009504: cell plate	6.31E-03
38	GO:0005773: vacuole	6.90E-03
39	GO:0005643: nuclear pore	1.03E-02
40	GO:0005783: endoplasmic reticulum	1.11E-02
41	GO:0005819: spindle	1.29E-02
42	GO:0048046: apoplast	1.34E-02
43	GO:0031201: SNARE complex	1.37E-02
44	GO:0031966: mitochondrial membrane	1.71E-02
45	GO:0005635: nuclear envelope	1.89E-02
46	GO:0005681: spliceosomal complex	2.02E-02
47	GO:0005747: mitochondrial respiratory chain complex I	2.07E-02
48	GO:0005834: heterotrimeric G-protein complex	2.12E-02
49	GO:0009706: chloroplast inner membrane	2.31E-02
50	GO:0009524: phragmoplast	2.81E-02
51	GO:0005759: mitochondrial matrix	3.19E-02
52	GO:0005802: trans-Golgi network	3.39E-02