co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G51710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0023052: signaling	0.00E+00
2	GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger	0.00E+00
3	GO:0030149: sphingolipid catabolic process	0.00E+00
4	GO:0006511: ubiquitin-dependent protein catabolic process	6.09E-34
5	GO:0051603: proteolysis involved in cellular protein catabolic process	5.90E-11
6	GO:0030163: protein catabolic process	4.58E-09
7	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.94E-08
8	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.57E-06
9	GO:0030433: ubiquitin-dependent ERAD pathway	5.83E-06
10	GO:0010043: response to zinc ion	5.87E-05
11	GO:0061014: positive regulation of mRNA catabolic process	6.42E-05
12	GO:0010265: SCF complex assembly	6.42E-05
13	GO:0015798: myo-inositol transport	6.42E-05
14	GO:1990542: mitochondrial transmembrane transport	6.42E-05
15	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	6.42E-05
16	GO:0006212: uracil catabolic process	1.55E-04
17	GO:0051788: response to misfolded protein	1.55E-04
18	GO:0019483: beta-alanine biosynthetic process	1.55E-04
19	GO:0019752: carboxylic acid metabolic process	1.55E-04
20	GO:0043132: NAD transport	1.55E-04
21	GO:2000072: regulation of defense response to fungus, incompatible interaction	1.55E-04
22	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	1.55E-04
23	GO:0046686: response to cadmium ion	1.56E-04
24	GO:0010498: proteasomal protein catabolic process	2.63E-04
25	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	2.63E-04
26	GO:0044375: regulation of peroxisome size	2.63E-04
27	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	2.63E-04
28	GO:0015858: nucleoside transport	3.82E-04
29	GO:0009647: skotomorphogenesis	3.82E-04
30	GO:0010587: miRNA catabolic process	3.82E-04
31	GO:0010255: glucose mediated signaling pathway	3.82E-04
32	GO:0001676: long-chain fatty acid metabolic process	3.82E-04
33	GO:0006571: tyrosine biosynthetic process	3.82E-04
34	GO:0010363: regulation of plant-type hypersensitive response	5.10E-04
35	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	5.10E-04
36	GO:0032957: inositol trisphosphate metabolic process	6.45E-04
37	GO:0009697: salicylic acid biosynthetic process	6.45E-04
38	GO:0097428: protein maturation by iron-sulfur cluster transfer	6.45E-04
39	GO:0042176: regulation of protein catabolic process	7.90E-04
40	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	7.90E-04
41	GO:0043248: proteasome assembly	7.90E-04
42	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	9.40E-04
43	GO:0009094: L-phenylalanine biosynthetic process	9.40E-04
44	GO:0045087: innate immune response	1.02E-03
45	GO:0070370: cellular heat acclimation	1.10E-03
46	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.10E-03
47	GO:0048528: post-embryonic root development	1.10E-03
48	GO:0006744: ubiquinone biosynthetic process	1.10E-03
49	GO:0006491: N-glycan processing	1.26E-03
50	GO:0006402: mRNA catabolic process	1.26E-03
51	GO:0031540: regulation of anthocyanin biosynthetic process	1.26E-03
52	GO:0040029: regulation of gene expression, epigenetic	1.26E-03
53	GO:0007186: G-protein coupled receptor signaling pathway	1.44E-03
54	GO:0043562: cellular response to nitrogen levels	1.44E-03
55	GO:0046685: response to arsenic-containing substance	1.62E-03
56	GO:0006486: protein glycosylation	1.73E-03
57	GO:0072593: reactive oxygen species metabolic process	2.21E-03
58	GO:0010102: lateral root morphogenesis	2.64E-03
59	GO:0009785: blue light signaling pathway	2.64E-03
60	GO:0006807: nitrogen compound metabolic process	2.64E-03
61	GO:0010187: negative regulation of seed germination	3.57E-03
62	GO:0008299: isoprenoid biosynthetic process	3.82E-03
63	GO:0015992: proton transport	4.08E-03
64	GO:0035428: hexose transmembrane transport	4.34E-03
65	GO:0071215: cellular response to abscisic acid stimulus	4.60E-03
66	GO:0001944: vasculature development	4.60E-03
67	GO:0042127: regulation of cell proliferation	4.87E-03
68	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.15E-03
69	GO:0010051: xylem and phloem pattern formation	5.43E-03
70	GO:0006520: cellular amino acid metabolic process	5.72E-03
71	GO:0046323: glucose import	5.72E-03
72	GO:0048825: cotyledon development	6.31E-03
73	GO:0009749: response to glucose	6.31E-03
74	GO:0010193: response to ozone	6.61E-03
75	GO:0009630: gravitropism	6.92E-03
76	GO:0010286: heat acclimation	7.88E-03
77	GO:0010027: thylakoid membrane organization	8.54E-03
78	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	8.88E-03
79	GO:0006888: ER to Golgi vesicle-mediated transport	9.57E-03
80	GO:0009817: defense response to fungus, incompatible interaction	1.03E-02
81	GO:0008219: cell death	1.03E-02
82	GO:0006499: N-terminal protein myristoylation	1.10E-02
83	GO:0010119: regulation of stomatal movement	1.14E-02
84	GO:0009408: response to heat	1.19E-02
85	GO:0009867: jasmonic acid mediated signaling pathway	1.22E-02
86	GO:0009853: photorespiration	1.22E-02
87	GO:0006839: mitochondrial transport	1.33E-02
88	GO:0006631: fatty acid metabolic process	1.37E-02
89	GO:0008283: cell proliferation	1.45E-02
90	GO:0009926: auxin polar transport	1.45E-02
91	GO:0006812: cation transport	1.71E-02
92	GO:0009736: cytokinin-activated signaling pathway	1.80E-02
93	GO:0009740: gibberellic acid mediated signaling pathway	2.21E-02
94	GO:0009553: embryo sac development	2.26E-02
95	GO:0051726: regulation of cell cycle	2.41E-02
96	GO:0009845: seed germination	2.86E-02
97	GO:0009790: embryo development	3.02E-02
98	GO:0010228: vegetative to reproductive phase transition of meristem	3.52E-02
99	GO:0009739: response to gibberellin	3.69E-02
100	GO:0009826: unidimensional cell growth	4.52E-02
101	GO:0009733: response to auxin	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0016247: channel regulator activity	0.00E+00
3	GO:0005095: GTPase inhibitor activity	0.00E+00
4	GO:0044610: FMN transmembrane transporter activity	0.00E+00
5	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
6	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
7	GO:0004298: threonine-type endopeptidase activity	1.07E-45
8	GO:0008233: peptidase activity	3.92E-28
9	GO:0036402: proteasome-activating ATPase activity	3.94E-08
10	GO:0017025: TBP-class protein binding	2.38E-06
11	GO:0016887: ATPase activity	5.44E-06
12	GO:0015230: FAD transmembrane transporter activity	6.42E-05
13	GO:0010013: N-1-naphthylphthalamic acid binding	6.42E-05
14	GO:0004175: endopeptidase activity	1.23E-04
15	GO:0051724: NAD transporter activity	1.55E-04
16	GO:0050347: trans-octaprenyltranstransferase activity	1.55E-04
17	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	1.55E-04
18	GO:0004534: 5'-3' exoribonuclease activity	1.55E-04
19	GO:0005366: myo-inositol:proton symporter activity	1.55E-04
20	GO:0015228: coenzyme A transmembrane transporter activity	1.55E-04
21	GO:0004148: dihydrolipoyl dehydrogenase activity	2.63E-04
22	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	2.63E-04
23	GO:0031683: G-protein beta/gamma-subunit complex binding	2.63E-04
24	GO:0047325: inositol tetrakisphosphate 1-kinase activity	2.63E-04
25	GO:0001664: G-protein coupled receptor binding	2.63E-04
26	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	3.82E-04
27	GO:0017077: oxidative phosphorylation uncoupler activity	3.82E-04
28	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	3.82E-04
29	GO:0004659: prenyltransferase activity	5.10E-04
30	GO:0015368: calcium:cation antiporter activity	5.10E-04
31	GO:0008409: 5'-3' exonuclease activity	5.10E-04
32	GO:0015369: calcium:proton antiporter activity	5.10E-04
33	GO:0080122: AMP transmembrane transporter activity	6.45E-04
34	GO:0102391: decanoate--CoA ligase activity	9.40E-04
35	GO:0004602: glutathione peroxidase activity	9.40E-04
36	GO:0005347: ATP transmembrane transporter activity	9.40E-04
37	GO:0004559: alpha-mannosidase activity	9.40E-04
38	GO:0051020: GTPase binding	9.40E-04
39	GO:0015217: ADP transmembrane transporter activity	9.40E-04
40	GO:0004467: long-chain fatty acid-CoA ligase activity	1.10E-03
41	GO:0016831: carboxy-lyase activity	1.10E-03
42	GO:0015491: cation:cation antiporter activity	1.26E-03
43	GO:0000989: transcription factor activity, transcription factor binding	1.62E-03
44	GO:0008417: fucosyltransferase activity	1.62E-03
45	GO:0030234: enzyme regulator activity	2.01E-03
46	GO:0004177: aminopeptidase activity	2.21E-03
47	GO:0004161: dimethylallyltranstransferase activity	2.21E-03
48	GO:0043130: ubiquitin binding	3.57E-03
49	GO:0004540: ribonuclease activity	4.08E-03
50	GO:0005355: glucose transmembrane transporter activity	6.01E-03
51	GO:0050897: cobalt ion binding	1.14E-02
52	GO:0003993: acid phosphatase activity	1.25E-02
53	GO:0005198: structural molecule activity	1.58E-02
54	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.07E-02
55	GO:0051082: unfolded protein binding	2.31E-02
56	GO:0030170: pyridoxal phosphate binding	2.92E-02
57	GO:0005507: copper ion binding	3.01E-02
58	GO:0015144: carbohydrate transmembrane transporter activity	3.08E-02
59	GO:0015297: antiporter activity	3.30E-02
60	GO:0005351: sugar:proton symporter activity	3.35E-02
61	GO:0005515: protein binding	3.78E-02
62	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.04E-02
63	GO:0008168: methyltransferase activity	4.52E-02
64	GO:0000287: magnesium ion binding	4.58E-02
65	GO:0004601: peroxidase activity	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0019774: proteasome core complex, beta-subunit complex	0.00E+00
2	GO:0000502: proteasome complex	5.34E-55
3	GO:0005839: proteasome core complex	1.07E-45
4	GO:0019773: proteasome core complex, alpha-subunit complex	4.71E-24
5	GO:0005829: cytosol	3.07E-14
6	GO:0008540: proteasome regulatory particle, base subcomplex	2.63E-09
7	GO:0005774: vacuolar membrane	3.42E-08
8	GO:0031597: cytosolic proteasome complex	7.01E-08
9	GO:0031595: nuclear proteasome complex	1.15E-07
10	GO:0046861: glyoxysomal membrane	9.10E-07
11	GO:0005737: cytoplasm	3.02E-06
12	GO:0009514: glyoxysome	3.64E-05
13	GO:0008541: proteasome regulatory particle, lid subcomplex	7.90E-05
14	GO:0022626: cytosolic ribosome	8.33E-05
15	GO:0005838: proteasome regulatory particle	2.63E-04
16	GO:0005844: polysome	5.10E-04
17	GO:0005779: integral component of peroxisomal membrane	1.44E-03
18	GO:0010494: cytoplasmic stress granule	1.62E-03
19	GO:0005758: mitochondrial intermembrane space	3.57E-03
20	GO:0070469: respiratory chain	3.82E-03
21	GO:0005634: nucleus	6.38E-03
22	GO:0005802: trans-Golgi network	6.88E-03
23	GO:0005773: vacuole	6.90E-03
24	GO:0032580: Golgi cisterna membrane	7.55E-03
25	GO:0005778: peroxisomal membrane	7.88E-03
26	GO:0005768: endosome	8.11E-03
27	GO:0005886: plasma membrane	8.44E-03
28	GO:0000932: P-body	8.54E-03
29	GO:0019005: SCF ubiquitin ligase complex	1.03E-02
30	GO:0005743: mitochondrial inner membrane	1.10E-02
31	GO:0000325: plant-type vacuole	1.14E-02
32	GO:0005819: spindle	1.29E-02
33	GO:0090406: pollen tube	1.45E-02
34	GO:0005747: mitochondrial respiratory chain complex I	2.07E-02
35	GO:0005834: heterotrimeric G-protein complex	2.12E-02
36	GO:0005777: peroxisome	2.43E-02
37	GO:0009524: phragmoplast	2.81E-02
38	GO:0005759: mitochondrial matrix	3.19E-02
39	GO:0009506: plasmodesma	3.29E-02
40	GO:0009705: plant-type vacuole membrane	3.41E-02
41	GO:0005783: endoplasmic reticulum	3.51E-02
42	GO:0048046: apoplast	4.67E-02
43	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.96E-02