Gene: AT1G51580
     


Gene description


TAIR ID: AT1G51580

Short description: RNA-binding KH domain-containing protein

Pathogen responsiveness: -1.18

General responsiveness: -2.83

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G158884  

Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


unkown


GO molecular function


RNA binding


Protein domain


PfamPF00013, KH domain
SMARTSM00322, KH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.563.93E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.521.44E-07
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.516.17E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.556.07E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.853.60E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.534.90E-05






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