Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G51580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031129: inductive cell-cell signaling0.00E+00
2GO:0007172: signal complex assembly0.00E+00
3GO:1905421: regulation of plant organ morphogenesis0.00E+00
4GO:0043488: regulation of mRNA stability0.00E+00
5GO:0061157: mRNA destabilization0.00E+00
6GO:0030155: regulation of cell adhesion0.00E+00
7GO:0090706: specification of plant organ position0.00E+00
8GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
9GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
10GO:0007037: vacuolar phosphate transport0.00E+00
11GO:0007638: mechanosensory behavior0.00E+00
12GO:0031116: positive regulation of microtubule polymerization0.00E+00
13GO:0010068: protoderm histogenesis0.00E+00
14GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.64E-06
15GO:0009067: aspartate family amino acid biosynthetic process3.55E-05
16GO:1902183: regulation of shoot apical meristem development1.00E-04
17GO:0010158: abaxial cell fate specification1.00E-04
18GO:0009944: polarity specification of adaxial/abaxial axis1.21E-04
19GO:0006468: protein phosphorylation1.76E-04
20GO:0009088: threonine biosynthetic process1.97E-04
21GO:0006264: mitochondrial DNA replication3.14E-04
22GO:0033259: plastid DNA replication3.14E-04
23GO:0006177: GMP biosynthetic process3.14E-04
24GO:0005991: trehalose metabolic process3.14E-04
25GO:0010450: inflorescence meristem growth3.14E-04
26GO:0006747: FAD biosynthetic process3.14E-04
27GO:0051171: regulation of nitrogen compound metabolic process3.14E-04
28GO:0010482: regulation of epidermal cell division3.14E-04
29GO:0009090: homoserine biosynthetic process3.14E-04
30GO:1902265: abscisic acid homeostasis3.14E-04
31GO:2000024: regulation of leaf development4.78E-04
32GO:0009638: phototropism5.66E-04
33GO:0016310: phosphorylation6.19E-04
34GO:0009658: chloroplast organization6.78E-04
35GO:0007154: cell communication6.87E-04
36GO:0034755: iron ion transmembrane transport6.87E-04
37GO:1900033: negative regulation of trichome patterning6.87E-04
38GO:0042814: monopolar cell growth6.87E-04
39GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole6.87E-04
40GO:1900871: chloroplast mRNA modification6.87E-04
41GO:2000039: regulation of trichome morphogenesis6.87E-04
42GO:0009089: lysine biosynthetic process via diaminopimelate7.62E-04
43GO:0043693: monoterpene biosynthetic process1.11E-03
44GO:0045604: regulation of epidermal cell differentiation1.11E-03
45GO:0009150: purine ribonucleotide metabolic process1.11E-03
46GO:0051604: protein maturation1.11E-03
47GO:0001578: microtubule bundle formation1.11E-03
48GO:0016050: vesicle organization1.11E-03
49GO:0045165: cell fate commitment1.11E-03
50GO:0048281: inflorescence morphogenesis1.11E-03
51GO:0031022: nuclear migration along microfilament1.11E-03
52GO:0051127: positive regulation of actin nucleation1.11E-03
53GO:0010187: negative regulation of seed germination1.52E-03
54GO:0005992: trehalose biosynthetic process1.52E-03
55GO:0032981: mitochondrial respiratory chain complex I assembly1.60E-03
56GO:2000904: regulation of starch metabolic process1.60E-03
57GO:0006164: purine nucleotide biosynthetic process1.60E-03
58GO:0031048: chromatin silencing by small RNA1.60E-03
59GO:0010148: transpiration1.60E-03
60GO:0006168: adenine salvage1.60E-03
61GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.60E-03
62GO:0006166: purine ribonucleoside salvage1.60E-03
63GO:0007231: osmosensory signaling pathway1.60E-03
64GO:0051639: actin filament network formation1.60E-03
65GO:0044211: CTP salvage1.60E-03
66GO:0019048: modulation by virus of host morphology or physiology1.60E-03
67GO:0009226: nucleotide-sugar biosynthetic process1.60E-03
68GO:0048645: animal organ formation1.60E-03
69GO:0010255: glucose mediated signaling pathway1.60E-03
70GO:0048530: fruit morphogenesis1.60E-03
71GO:0007623: circadian rhythm1.61E-03
72GO:0007166: cell surface receptor signaling pathway1.98E-03
73GO:0051567: histone H3-K9 methylation2.14E-03
74GO:0007020: microtubule nucleation2.14E-03
75GO:0044206: UMP salvage2.14E-03
76GO:0009902: chloroplast relocation2.14E-03
77GO:0009165: nucleotide biosynthetic process2.14E-03
78GO:0048629: trichome patterning2.14E-03
79GO:0051764: actin crosslink formation2.14E-03
80GO:0051322: anaphase2.14E-03
81GO:2000122: negative regulation of stomatal complex development2.14E-03
82GO:0022622: root system development2.14E-03
83GO:0033500: carbohydrate homeostasis2.14E-03
84GO:0045038: protein import into chloroplast thylakoid membrane2.74E-03
85GO:0044209: AMP salvage2.74E-03
86GO:0010375: stomatal complex patterning2.74E-03
87GO:0016131: brassinosteroid metabolic process2.74E-03
88GO:0046785: microtubule polymerization2.74E-03
89GO:0009958: positive gravitropism3.01E-03
90GO:0006508: proteolysis3.11E-03
91GO:0048367: shoot system development3.31E-03
92GO:0006206: pyrimidine nucleobase metabolic process3.38E-03
93GO:0000741: karyogamy3.38E-03
94GO:0016458: gene silencing3.38E-03
95GO:0009959: negative gravitropism3.38E-03
96GO:0006139: nucleobase-containing compound metabolic process3.38E-03
97GO:0009740: gibberellic acid mediated signaling pathway3.73E-03
98GO:0032502: developmental process3.97E-03
99GO:0009099: valine biosynthetic process4.06E-03
100GO:0009903: chloroplast avoidance movement4.06E-03
101GO:0048444: floral organ morphogenesis4.06E-03
102GO:0042372: phylloquinone biosynthetic process4.06E-03
103GO:0009082: branched-chain amino acid biosynthetic process4.06E-03
104GO:0010103: stomatal complex morphogenesis4.80E-03
105GO:0032880: regulation of protein localization4.80E-03
106GO:0010374: stomatal complex development4.80E-03
107GO:0010161: red light signaling pathway4.80E-03
108GO:0009610: response to symbiotic fungus4.80E-03
109GO:0048528: post-embryonic root development4.80E-03
110GO:0010050: vegetative phase change4.80E-03
111GO:0070370: cellular heat acclimation4.80E-03
112GO:0051607: defense response to virus5.07E-03
113GO:0042255: ribosome assembly5.57E-03
114GO:0010078: maintenance of root meristem identity5.57E-03
115GO:0006353: DNA-templated transcription, termination5.57E-03
116GO:0009704: de-etiolation5.57E-03
117GO:0070413: trehalose metabolism in response to stress5.57E-03
118GO:0009231: riboflavin biosynthetic process5.57E-03
119GO:0052543: callose deposition in cell wall5.57E-03
120GO:0033386: geranylgeranyl diphosphate biosynthetic process5.57E-03
121GO:0009787: regulation of abscisic acid-activated signaling pathway5.57E-03
122GO:0009850: auxin metabolic process5.57E-03
123GO:0010029: regulation of seed germination5.68E-03
124GO:0009097: isoleucine biosynthetic process6.39E-03
125GO:0010100: negative regulation of photomorphogenesis6.39E-03
126GO:0006997: nucleus organization6.39E-03
127GO:0043562: cellular response to nitrogen levels6.39E-03
128GO:0010093: specification of floral organ identity6.39E-03
129GO:0010099: regulation of photomorphogenesis6.39E-03
130GO:0001558: regulation of cell growth6.39E-03
131GO:0009827: plant-type cell wall modification6.39E-03
132GO:0010052: guard cell differentiation6.39E-03
133GO:0030154: cell differentiation7.02E-03
134GO:0033384: geranyl diphosphate biosynthetic process7.24E-03
135GO:0006783: heme biosynthetic process7.24E-03
136GO:0000373: Group II intron splicing7.24E-03
137GO:0006189: 'de novo' IMP biosynthetic process7.24E-03
138GO:0000902: cell morphogenesis7.24E-03
139GO:0009051: pentose-phosphate shunt, oxidative branch7.24E-03
140GO:0045337: farnesyl diphosphate biosynthetic process7.24E-03
141GO:0048527: lateral root development8.12E-03
142GO:0071577: zinc II ion transmembrane transport8.14E-03
143GO:0009098: leucine biosynthetic process8.14E-03
144GO:0009086: methionine biosynthetic process8.14E-03
145GO:1900865: chloroplast RNA modification8.14E-03
146GO:0010380: regulation of chlorophyll biosynthetic process8.14E-03
147GO:0030422: production of siRNA involved in RNA interference9.07E-03
148GO:0009299: mRNA transcription9.07E-03
149GO:0006535: cysteine biosynthetic process from serine9.07E-03
150GO:0006879: cellular iron ion homeostasis1.00E-02
151GO:0006415: translational termination1.00E-02
152GO:0009684: indoleacetic acid biosynthetic process1.00E-02
153GO:0006816: calcium ion transport1.00E-02
154GO:0009773: photosynthetic electron transport in photosystem I1.00E-02
155GO:0006839: mitochondrial transport1.02E-02
156GO:0006631: fatty acid metabolic process1.06E-02
157GO:0010582: floral meristem determinacy1.11E-02
158GO:0006790: sulfur compound metabolic process1.11E-02
159GO:0051707: response to other organism1.15E-02
160GO:0010628: positive regulation of gene expression1.21E-02
161GO:0009785: blue light signaling pathway1.21E-02
162GO:0006006: glucose metabolic process1.21E-02
163GO:0030036: actin cytoskeleton organization1.21E-02
164GO:0009725: response to hormone1.21E-02
165GO:0009767: photosynthetic electron transport chain1.21E-02
166GO:0010588: cotyledon vascular tissue pattern formation1.21E-02
167GO:2000012: regulation of auxin polar transport1.21E-02
168GO:0030048: actin filament-based movement1.21E-02
169GO:0009965: leaf morphogenesis1.29E-02
170GO:0009933: meristem structural organization1.32E-02
171GO:0009934: regulation of meristem structural organization1.32E-02
172GO:0048467: gynoecium development1.32E-02
173GO:0010020: chloroplast fission1.32E-02
174GO:0090351: seedling development1.43E-02
175GO:0010030: positive regulation of seed germination1.43E-02
176GO:0070588: calcium ion transmembrane transport1.43E-02
177GO:0006833: water transport1.54E-02
178GO:0007010: cytoskeleton organization1.66E-02
179GO:0051017: actin filament bundle assembly1.66E-02
180GO:0019344: cysteine biosynthetic process1.66E-02
181GO:0006417: regulation of translation1.72E-02
182GO:0006825: copper ion transport1.78E-02
183GO:0051302: regulation of cell division1.78E-02
184GO:0008299: isoprenoid biosynthetic process1.78E-02
185GO:0043622: cortical microtubule organization1.78E-02
186GO:0006306: DNA methylation1.91E-02
187GO:0001944: vasculature development2.16E-02
188GO:0010082: regulation of root meristem growth2.16E-02
189GO:0009686: gibberellin biosynthetic process2.16E-02
190GO:0010091: trichome branching2.29E-02
191GO:0016117: carotenoid biosynthetic process2.43E-02
192GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.43E-02
193GO:0008284: positive regulation of cell proliferation2.43E-02
194GO:0042335: cuticle development2.57E-02
195GO:0000271: polysaccharide biosynthetic process2.57E-02
196GO:0080022: primary root development2.57E-02
197GO:0008033: tRNA processing2.57E-02
198GO:0034220: ion transmembrane transport2.57E-02
199GO:0010087: phloem or xylem histogenesis2.57E-02
200GO:0042631: cellular response to water deprivation2.57E-02
201GO:0000226: microtubule cytoskeleton organization2.57E-02
202GO:0055085: transmembrane transport2.67E-02
203GO:0010197: polar nucleus fusion2.71E-02
204GO:0010182: sugar mediated signaling pathway2.71E-02
205GO:0006342: chromatin silencing2.71E-02
206GO:0008360: regulation of cell shape2.71E-02
207GO:0045489: pectin biosynthetic process2.71E-02
208GO:0010154: fruit development2.71E-02
209GO:0009646: response to absence of light2.85E-02
210GO:0009851: auxin biosynthetic process3.00E-02
211GO:0048825: cotyledon development3.00E-02
212GO:0016132: brassinosteroid biosynthetic process3.15E-02
213GO:0006464: cellular protein modification process3.61E-02
214GO:0040008: regulation of growth3.66E-02
215GO:0071805: potassium ion transmembrane transport3.77E-02
216GO:0000910: cytokinesis3.92E-02
217GO:0009816: defense response to bacterium, incompatible interaction4.25E-02
218GO:0009627: systemic acquired resistance4.42E-02
219GO:0008380: RNA splicing4.56E-02
220GO:0015995: chlorophyll biosynthetic process4.59E-02
RankGO TermAdjusted P value
1GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
2GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
3GO:0019136: deoxynucleoside kinase activity0.00E+00
4GO:0004072: aspartate kinase activity3.55E-05
5GO:0016301: kinase activity1.20E-04
6GO:0004674: protein serine/threonine kinase activity2.43E-04
7GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.68E-04
8GO:0005524: ATP binding3.11E-04
9GO:0010313: phytochrome binding3.14E-04
10GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.14E-04
11GO:0050139: nicotinate-N-glucosyltransferase activity3.14E-04
12GO:0004008: copper-exporting ATPase activity3.14E-04
13GO:0050017: L-3-cyanoalanine synthase activity6.87E-04
14GO:0017118: lipoyltransferase activity6.87E-04
15GO:0043425: bHLH transcription factor binding6.87E-04
16GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity6.87E-04
17GO:0003938: IMP dehydrogenase activity6.87E-04
18GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity6.87E-04
19GO:0080097: L-tryptophan:pyruvate aminotransferase activity6.87E-04
20GO:0003919: FMN adenylyltransferase activity6.87E-04
21GO:0004412: homoserine dehydrogenase activity6.87E-04
22GO:0070330: aromatase activity1.11E-03
23GO:0017172: cysteine dioxygenase activity1.60E-03
24GO:0035197: siRNA binding1.60E-03
25GO:0052656: L-isoleucine transaminase activity1.60E-03
26GO:0047627: adenylylsulfatase activity1.60E-03
27GO:0052654: L-leucine transaminase activity1.60E-03
28GO:0052655: L-valine transaminase activity1.60E-03
29GO:0001872: (1->3)-beta-D-glucan binding1.60E-03
30GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.60E-03
31GO:0003999: adenine phosphoribosyltransferase activity1.60E-03
32GO:0004176: ATP-dependent peptidase activity1.84E-03
33GO:0043621: protein self-association1.94E-03
34GO:0042277: peptide binding2.14E-03
35GO:0004845: uracil phosphoribosyltransferase activity2.14E-03
36GO:0004345: glucose-6-phosphate dehydrogenase activity2.14E-03
37GO:0008409: 5'-3' exonuclease activity2.14E-03
38GO:0080032: methyl jasmonate esterase activity2.14E-03
39GO:0004084: branched-chain-amino-acid transaminase activity2.14E-03
40GO:0019199: transmembrane receptor protein kinase activity2.14E-03
41GO:0003727: single-stranded RNA binding2.39E-03
42GO:0018685: alkane 1-monooxygenase activity2.74E-03
43GO:0016846: carbon-sulfur lyase activity2.74E-03
44GO:0016773: phosphotransferase activity, alcohol group as acceptor2.74E-03
45GO:0042578: phosphoric ester hydrolase activity3.38E-03
46GO:0016208: AMP binding3.38E-03
47GO:0003730: mRNA 3'-UTR binding4.06E-03
48GO:0004124: cysteine synthase activity4.06E-03
49GO:0004849: uridine kinase activity4.06E-03
50GO:0016597: amino acid binding5.07E-03
51GO:0004311: farnesyltranstransferase activity5.57E-03
52GO:0004252: serine-type endopeptidase activity6.13E-03
53GO:0030247: polysaccharide binding6.33E-03
54GO:0005375: copper ion transmembrane transporter activity6.39E-03
55GO:0003747: translation release factor activity7.24E-03
56GO:0004337: geranyltranstransferase activity7.24E-03
57GO:0016614: oxidoreductase activity, acting on CH-OH group of donors8.12E-03
58GO:0005381: iron ion transmembrane transporter activity8.14E-03
59GO:0008017: microtubule binding8.57E-03
60GO:0004805: trehalose-phosphatase activity9.07E-03
61GO:0004713: protein tyrosine kinase activity9.07E-03
62GO:0047372: acylglycerol lipase activity1.00E-02
63GO:0004161: dimethylallyltranstransferase activity1.00E-02
64GO:0050661: NADP binding1.02E-02
65GO:0042802: identical protein binding1.10E-02
66GO:0004521: endoribonuclease activity1.11E-02
67GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.21E-02
68GO:0005262: calcium channel activity1.21E-02
69GO:0004672: protein kinase activity1.25E-02
70GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.32E-02
71GO:0008083: growth factor activity1.32E-02
72GO:0004190: aspartic-type endopeptidase activity1.43E-02
73GO:0016788: hydrolase activity, acting on ester bonds1.45E-02
74GO:0003887: DNA-directed DNA polymerase activity1.54E-02
75GO:0005385: zinc ion transmembrane transporter activity1.66E-02
76GO:0005528: FK506 binding1.66E-02
77GO:0015079: potassium ion transmembrane transporter activity1.78E-02
78GO:0008324: cation transmembrane transporter activity1.78E-02
79GO:0033612: receptor serine/threonine kinase binding1.91E-02
80GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.03E-02
81GO:0030570: pectate lyase activity2.16E-02
82GO:0004871: signal transducer activity2.47E-02
83GO:0008536: Ran GTPase binding2.71E-02
84GO:0001085: RNA polymerase II transcription factor binding2.71E-02
85GO:0050662: coenzyme binding2.85E-02
86GO:0016829: lyase activity3.00E-02
87GO:0000156: phosphorelay response regulator activity3.45E-02
88GO:0051015: actin filament binding3.45E-02
89GO:0016791: phosphatase activity3.61E-02
90GO:0005515: protein binding3.61E-02
91GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.77E-02
92GO:0008237: metallopeptidase activity3.77E-02
93GO:0015250: water channel activity4.09E-02
94GO:0008236: serine-type peptidase activity4.76E-02
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Gene type



Gene DE type