Gene: AT1G49200
     

Gene description


TAIR ID: AT1G49200

Short description: RING/U-box superfamily protein

Pathogen responsiveness: 0.16

General responsiveness: -0.05

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 21 (Top10%)

click to view PPI network

Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h2.128.01E-08
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h2.347.58E-09
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min-1.553.61E-02
GSE17464Laer, controlLaer, PstDC3000 12 h2.074.37E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h4.118.12E-15
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.811.89E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.891.76E-14
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.992.21E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.829.76E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.561.37E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.731.52E-02
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min-1.791.61E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.351.71E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.984.28E-15
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.627.75E-10
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.191.24E-16
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.772.19E-11
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.362.69E-18
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h-1.624.41E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.151.25E-16
GSE5685Col, WT, control 16 hCol, WT, Ps ES4326 AvrRpt2 16 h-1.523.56E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h-1.661.43E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.314.44E-10






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