Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G49200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
2GO:0033481: galacturonate biosynthetic process5.48E-05
3GO:0080164: regulation of nitric oxide metabolic process5.48E-05
4GO:0048438: floral whorl development5.48E-05
5GO:0010200: response to chitin1.02E-04
6GO:0007154: cell communication1.34E-04
7GO:0071497: cellular response to freezing1.34E-04
8GO:0010220: positive regulation of vernalization response1.34E-04
9GO:0051592: response to calcium ion1.34E-04
10GO:1900386: positive regulation of flavonol biosynthetic process1.34E-04
11GO:0006556: S-adenosylmethionine biosynthetic process2.28E-04
12GO:0019722: calcium-mediated signaling2.29E-04
13GO:0009741: response to brassinosteroid2.91E-04
14GO:0009828: plant-type cell wall loosening4.36E-04
15GO:0046345: abscisic acid catabolic process4.45E-04
16GO:0007267: cell-cell signaling4.63E-04
17GO:0009826: unidimensional cell growth6.41E-04
18GO:0010304: PSII associated light-harvesting complex II catabolic process6.92E-04
19GO:0006555: methionine metabolic process6.92E-04
20GO:0000060: protein import into nucleus, translocation6.92E-04
21GO:1900425: negative regulation of defense response to bacterium6.92E-04
22GO:0010077: maintenance of inflorescence meristem identity8.25E-04
23GO:0009612: response to mechanical stimulus8.25E-04
24GO:0010076: maintenance of floral meristem identity8.25E-04
25GO:0051510: regulation of unidimensional cell growth9.62E-04
26GO:0010038: response to metal ion9.62E-04
27GO:0050829: defense response to Gram-negative bacterium9.62E-04
28GO:0042542: response to hydrogen peroxide1.03E-03
29GO:0030162: regulation of proteolysis1.11E-03
30GO:0010099: regulation of photomorphogenesis1.26E-03
31GO:0048574: long-day photoperiodism, flowering1.26E-03
32GO:0009751: response to salicylic acid1.39E-03
33GO:0009809: lignin biosynthetic process1.42E-03
34GO:0009585: red, far-red light phototransduction1.42E-03
35GO:0009638: phototropism1.58E-03
36GO:0009733: response to auxin1.64E-03
37GO:0043069: negative regulation of programmed cell death1.75E-03
38GO:0051555: flavonol biosynthetic process1.75E-03
39GO:1903507: negative regulation of nucleic acid-templated transcription1.93E-03
40GO:0000272: polysaccharide catabolic process1.93E-03
41GO:0000038: very long-chain fatty acid metabolic process1.93E-03
42GO:0009698: phenylpropanoid metabolic process1.93E-03
43GO:0016024: CDP-diacylglycerol biosynthetic process2.11E-03
44GO:0010582: floral meristem determinacy2.11E-03
45GO:0009409: response to cold2.18E-03
46GO:0018107: peptidyl-threonine phosphorylation2.30E-03
47GO:0034605: cellular response to heat2.49E-03
48GO:0010143: cutin biosynthetic process2.49E-03
49GO:0009225: nucleotide-sugar metabolic process2.70E-03
50GO:0019953: sexual reproduction3.32E-03
51GO:0045893: positive regulation of transcription, DNA-templated3.47E-03
52GO:2000022: regulation of jasmonic acid mediated signaling pathway3.77E-03
53GO:0010017: red or far-red light signaling pathway3.77E-03
54GO:0006730: one-carbon metabolic process3.77E-03
55GO:0009411: response to UV4.00E-03
56GO:0040007: growth4.00E-03
57GO:0010584: pollen exine formation4.23E-03
58GO:0000271: polysaccharide biosynthetic process4.71E-03
59GO:0010268: brassinosteroid homeostasis4.96E-03
60GO:0045489: pectin biosynthetic process4.96E-03
61GO:0009958: positive gravitropism4.96E-03
62GO:0009646: response to absence of light5.22E-03
63GO:0009791: post-embryonic development5.48E-03
64GO:0016132: brassinosteroid biosynthetic process5.74E-03
65GO:0048510: regulation of timing of transition from vegetative to reproductive phase5.74E-03
66GO:0002229: defense response to oomycetes5.74E-03
67GO:0010583: response to cyclopentenone6.00E-03
68GO:0080167: response to karrikin6.54E-03
69GO:0016125: sterol metabolic process6.55E-03
70GO:0009639: response to red or far red light6.55E-03
71GO:0001666: response to hypoxia7.40E-03
72GO:0009788: negative regulation of abscisic acid-activated signaling pathway7.69E-03
73GO:0045454: cell redox homeostasis7.82E-03
74GO:0030154: cell differentiation7.94E-03
75GO:0048573: photoperiodism, flowering8.29E-03
76GO:0016311: dephosphorylation8.60E-03
77GO:0006351: transcription, DNA-templated8.92E-03
78GO:0009813: flavonoid biosynthetic process9.22E-03
79GO:0010218: response to far red light9.54E-03
80GO:0009408: response to heat9.65E-03
81GO:0048527: lateral root development9.86E-03
82GO:0009753: response to jasmonic acid1.04E-02
83GO:0016051: carbohydrate biosynthetic process1.05E-02
84GO:0009637: response to blue light1.05E-02
85GO:0045087: innate immune response1.05E-02
86GO:0006355: regulation of transcription, DNA-templated1.06E-02
87GO:0009873: ethylene-activated signaling pathway1.25E-02
88GO:0010114: response to red light1.26E-02
89GO:0006357: regulation of transcription from RNA polymerase II promoter1.28E-02
90GO:0000165: MAPK cascade1.44E-02
91GO:0031347: regulation of defense response1.44E-02
92GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.44E-02
93GO:0009664: plant-type cell wall organization1.48E-02
94GO:0010224: response to UV-B1.59E-02
95GO:0009909: regulation of flower development1.67E-02
96GO:0006952: defense response1.84E-02
97GO:0018105: peptidyl-serine phosphorylation2.04E-02
98GO:0009742: brassinosteroid mediated signaling pathway2.08E-02
99GO:0006633: fatty acid biosynthetic process2.75E-02
100GO:0040008: regulation of growth2.85E-02
101GO:0016567: protein ubiquitination2.91E-02
102GO:0010150: leaf senescence2.94E-02
103GO:0009739: response to gibberellin3.19E-02
104GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.19E-02
105GO:0009414: response to water deprivation3.40E-02
106GO:0071555: cell wall organization3.48E-02
107GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.80E-02
108GO:0006970: response to osmotic stress4.23E-02
109GO:0009723: response to ethylene4.45E-02
110GO:0048366: leaf development4.51E-02
111GO:0046777: protein autophosphorylation4.90E-02
RankGO TermAdjusted P value
1GO:0080132: fatty acid alpha-hydroxylase activity5.48E-05
2GO:0004478: methionine adenosyltransferase activity2.28E-04
3GO:0010295: (+)-abscisic acid 8'-hydroxylase activity2.28E-04
4GO:0050378: UDP-glucuronate 4-epimerase activity4.45E-04
5GO:0045430: chalcone isomerase activity4.45E-04
6GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity6.92E-04
7GO:0004366: glycerol-3-phosphate O-acyltransferase activity6.92E-04
8GO:0016161: beta-amylase activity8.25E-04
9GO:0016621: cinnamoyl-CoA reductase activity9.62E-04
10GO:0043565: sequence-specific DNA binding1.18E-03
11GO:0016207: 4-coumarate-CoA ligase activity1.41E-03
12GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.49E-03
13GO:0003712: transcription cofactor activity2.70E-03
14GO:0003714: transcription corepressor activity3.11E-03
15GO:0008134: transcription factor binding3.11E-03
16GO:0004176: ATP-dependent peptidase activity3.54E-03
17GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.77E-03
18GO:0004402: histone acetyltransferase activity4.71E-03
19GO:0016791: phosphatase activity6.55E-03
20GO:0016722: oxidoreductase activity, oxidizing metal ions6.83E-03
21GO:0008237: metallopeptidase activity6.83E-03
22GO:0044212: transcription regulatory region DNA binding7.12E-03
23GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.82E-03
24GO:0004871: signal transducer activity8.20E-03
25GO:0030247: polysaccharide binding8.29E-03
26GO:0003700: transcription factor activity, sequence-specific DNA binding8.36E-03
27GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding8.71E-03
28GO:0004222: metalloendopeptidase activity9.54E-03
29GO:0004842: ubiquitin-protein transferase activity1.07E-02
30GO:0016298: lipase activity1.59E-02
31GO:0031625: ubiquitin protein ligase binding1.67E-02
32GO:0016874: ligase activity1.91E-02
33GO:0015035: protein disulfide oxidoreductase activity2.04E-02
34GO:0016746: transferase activity, transferring acyl groups2.04E-02
35GO:0016758: transferase activity, transferring hexosyl groups2.29E-02
36GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.57E-02
37GO:0005506: iron ion binding3.43E-02
38GO:0003824: catalytic activity3.82E-02
39GO:0046982: protein heterodimerization activity3.96E-02
RankGO TermAdjusted P value
1GO:0009505: plant-type cell wall5.55E-05
2GO:0005615: extracellular space4.47E-04
3GO:0009506: plasmodesma7.39E-04
4GO:0048046: apoplast2.47E-03
5GO:0005618: cell wall2.87E-03
6GO:0015629: actin cytoskeleton4.00E-03
7GO:0031225: anchored component of membrane5.11E-03
8GO:0032580: Golgi cisterna membrane6.55E-03
9GO:0019005: SCF ubiquitin ligase complex8.91E-03
10GO:0005794: Golgi apparatus1.38E-02
11GO:0005576: extracellular region2.15E-02
12GO:0005886: plasma membrane3.18E-02
13GO:0046658: anchored component of plasma membrane3.59E-02
14GO:0009536: plastid4.26E-02
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Gene type



Gene DE type