gene detail

Gene description

TAIR ID: AT1G48620

Short description: high mobility group A5

Pathogen responsiveness: -1.92

General responsiveness: -3.53

Orthologous

Rice:

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

nucleosome assembly, DNA mediated transformation

GO cellular component

nucleosome, nucleus, chloroplast, nucleolus

GO molecular function

DNA binding

Protein domain

Pfam	PF00538, linker histone H1 and H5 family
SMART	SM00384, AT_hook
SMART	SM00526, H15

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT1G24260, AT4G18960

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

3 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.56	2.84E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.88	1.33E-02
GSE67100	pDMR6:GFP GFP-negative, control 7 d	pDMR6:GFP GFP-positive, Hpa Noks1 7 d	-2.92	4.02E-02

Showing 1 to 3 of 3 entries