gene detail

Gene description

TAIR ID: AT1G47250

Short description: 20S proteasome alpha subunit F2

Pathogen responsiveness: -1.95

General responsiveness: -2.67

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

ubiquitin-dependent protein catabolic process

GO cellular component

nucleus, plasmodesma, proteasome core complex, cytoplasm, cytosol, plasma membrane

GO molecular function

threonine-type endopeptidase activity, peptidase activity

Protein domain

Pfam	PF10584, Proteasome subunit A N-terminal signature
Pfam	PF00227, Proteasome subunit
SMART	SM00948, Proteasome_A_N

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath03050: Proteasome

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.61	2.99E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.77	6.69E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.97	1.33E-13