Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G47250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071076: RNA 3' uridylation1.21E-05
2GO:0050688: regulation of defense response to virus3.21E-05
3GO:0009156: ribonucleoside monophosphate biosynthetic process3.21E-05
4GO:0035335: peptidyl-tyrosine dephosphorylation3.21E-05
5GO:0046739: transport of virus in multicellular host8.79E-05
6GO:0060964: regulation of gene silencing by miRNA8.79E-05
7GO:0010971: positive regulation of G2/M transition of mitotic cell cycle8.79E-05
8GO:0009165: nucleotide biosynthetic process1.22E-04
9GO:0033320: UDP-D-xylose biosynthetic process1.22E-04
10GO:0033356: UDP-L-arabinose metabolic process1.22E-04
11GO:0042732: D-xylose metabolic process1.98E-04
12GO:0009612: response to mechanical stimulus2.39E-04
13GO:0006401: RNA catabolic process2.82E-04
14GO:0000338: protein deneddylation2.82E-04
15GO:0010100: negative regulation of photomorphogenesis3.73E-04
16GO:0010497: plasmodesmata-mediated intercellular transport3.73E-04
17GO:0090305: nucleic acid phosphodiester bond hydrolysis4.21E-04
18GO:0043067: regulation of programmed cell death4.69E-04
19GO:0072593: reactive oxygen species metabolic process5.71E-04
20GO:0006913: nucleocytoplasmic transport5.71E-04
21GO:0009225: nucleotide-sugar metabolic process7.88E-04
22GO:0034976: response to endoplasmic reticulum stress8.44E-04
23GO:0009116: nucleoside metabolic process9.02E-04
24GO:0000027: ribosomal large subunit assembly9.02E-04
25GO:0000302: response to reactive oxygen species1.61E-03
26GO:0030163: protein catabolic process1.76E-03
27GO:0009735: response to cytokinin2.38E-03
28GO:0030244: cellulose biosynthetic process2.46E-03
29GO:0009832: plant-type cell wall biogenesis2.55E-03
30GO:0010043: response to zinc ion2.71E-03
31GO:0009651: response to salt stress2.91E-03
32GO:0034599: cellular response to oxidative stress2.97E-03
33GO:0009926: auxin polar transport3.43E-03
34GO:0009640: photomorphogenesis3.43E-03
35GO:0009585: red, far-red light phototransduction4.20E-03
36GO:0048316: seed development4.81E-03
37GO:0071555: cell wall organization5.22E-03
38GO:0009553: embryo sac development5.23E-03
39GO:0042744: hydrogen peroxide catabolic process6.82E-03
40GO:0009790: embryo development6.94E-03
41GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.43E-03
42GO:0006470: protein dephosphorylation8.56E-03
43GO:0045454: cell redox homeostasis1.40E-02
44GO:0006457: protein folding2.94E-02
45GO:0006511: ubiquitin-dependent protein catabolic process3.04E-02
46GO:0006979: response to oxidative stress4.06E-02
47GO:0009733: response to auxin4.39E-02
RankGO TermAdjusted P value
1GO:0050265: RNA uridylyltransferase activity1.21E-05
2GO:0019784: NEDD8-specific protease activity1.21E-05
3GO:0004749: ribose phosphate diphosphokinase activity8.79E-05
4GO:0016688: L-ascorbate peroxidase activity1.98E-04
5GO:0048040: UDP-glucuronate decarboxylase activity1.98E-04
6GO:0004130: cytochrome-c peroxidase activity1.98E-04
7GO:0070403: NAD+ binding2.39E-04
8GO:0004725: protein tyrosine phosphatase activity8.44E-04
9GO:0016779: nucleotidyltransferase activity1.08E-03
10GO:0003756: protein disulfide isomerase activity1.21E-03
11GO:0004722: protein serine/threonine phosphatase activity1.33E-03
12GO:0004518: nuclease activity1.68E-03
13GO:0005096: GTPase activator activity2.55E-03
14GO:0030246: carbohydrate binding3.48E-03
15GO:0004650: polygalacturonase activity5.02E-03
16GO:0016829: lyase activity6.58E-03
17GO:0000287: magnesium ion binding1.04E-02
18GO:0004601: peroxidase activity1.06E-02
19GO:0016887: ATPase activity2.22E-02
20GO:0000166: nucleotide binding2.44E-02
21GO:0003824: catalytic activity4.32E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005838: proteasome regulatory particle5.78E-05
3GO:0000502: proteasome complex2.26E-04
4GO:0000326: protein storage vacuole3.73E-04
5GO:0008180: COP9 signalosome4.21E-04
6GO:0008541: proteasome regulatory particle, lid subcomplex5.71E-04
7GO:0043234: protein complex8.44E-04
8GO:0031965: nuclear membrane1.54E-03
9GO:0000932: P-body2.06E-03
10GO:0005788: endoplasmic reticulum lumen2.14E-03
11GO:0005819: spindle3.06E-03
12GO:0005635: nuclear envelope4.40E-03
13GO:0009543: chloroplast thylakoid lumen6.23E-03
14GO:0009524: phragmoplast6.47E-03
15GO:0009505: plant-type cell wall6.53E-03
16GO:0005783: endoplasmic reticulum7.36E-03
17GO:0005829: cytosol1.03E-02
18GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.13E-02
19GO:0005774: vacuolar membrane1.81E-02
20GO:0009579: thylakoid2.77E-02
21GO:0005840: ribosome4.18E-02
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Gene type



Gene DE type