Gene: AT1G34180
     


Gene description


TAIR ID: AT1G34180

Short description: NAC domain containing protein 16

Pathogen responsiveness: 0.12

General responsiveness: -0.43

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription, DNA-templated, multicellular organism development, positive regulation of leaf senescence, regulation of transcription, response to chitin, transcription


GO cellular component


integral component of membrane, nucleus


GO molecular function


DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF02365, No apical meristem (NAM) protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G24050, AT4G18770, AT4G34680, AT2G45050, AT3G60530, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.631.60E-06
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d1.657.82E-13
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.103.61E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.485.58E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.351.28E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.652.98E-08
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA2.842.24E-04
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d2.404.72E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.801.93E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.873.09E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.143.42E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.908.49E-05
GSE37921Col, WT, controlCol, WT, CMV1.553.06E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.114.71E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.911.04E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.242.93E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.037.29E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.593.02E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.785.55E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.535.15E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.833.17E-10
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.899.13E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.561.78E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.223.32E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.591.81E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.461.81E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h1.732.49E-05






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